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Cluster: HRGMv2_0534_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0534_45 HRGMv2_0534_45_7 6426 7586 + GT4
pfam HRGMv2_0534_45 HRGMv2_0534_45_8 7576 8676 + PS_pyruv_trans
CAZyme HRGMv2_0534_45 HRGMv2_0534_45_9 8677 9885 + GT4
pfam HRGMv2_0534_45 HRGMv2_0534_45_10 10016 10396 + PDDEXK_3
CAZyme HRGMv2_0534_45 HRGMv2_0534_45_11 10563 11261 + GT32
pfam HRGMv2_0534_45 HRGMv2_0534_45_12 11292 12428 + EpsG
CAZyme HRGMv2_0534_45 HRGMv2_0534_45_13 12428 13216 + GT2
CAZyme HRGMv2_0534_45 HRGMv2_0534_45_14 13241 14260 + GT2
CAZyme HRGMv2_0534_45 HRGMv2_0534_45_15 14271 15395 + GT4
pfam HRGMv2_0534_45 HRGMv2_0534_45_16 15485 15874 + PDDEXK_3
TC HRGMv2_0534_45 HRGMv2_0534_45_17 15971 16582 + 9.B.18.1.2
Gene ID: HRGMv2_0534_45_7
Type: CAZyme
Location: 6426 - 7586 (+)
Gene ID: HRGMv2_0534_45_8
Type: pfam
Location: 7576 - 8676 (+)
Gene ID: HRGMv2_0534_45_9
Type: CAZyme
Location: 8677 - 9885 (+)
Gene ID: HRGMv2_0534_45_10
Type: pfam
Location: 10016 - 10396 (+)
Gene ID: HRGMv2_0534_45_11
Type: CAZyme
Location: 10563 - 11261 (+)
Gene ID: HRGMv2_0534_45_12
Type: pfam
Location: 11292 - 12428 (+)
Gene ID: HRGMv2_0534_45_13
Type: CAZyme
Location: 12428 - 13216 (+)
Gene ID: HRGMv2_0534_45_14
Type: CAZyme
Location: 13241 - 14260 (+)
Gene ID: HRGMv2_0534_45_15
Type: CAZyme
Location: 14271 - 15395 (+)
Gene ID: HRGMv2_0534_45_16
Type: pfam
Location: 15485 - 15874 (+)
Gene ID: HRGMv2_0534_45_17
Type: TC
Location: 15971 - 16582 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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