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Cluster: HRGMv2_0534_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0534_13 HRGMv2_0534_13_29 31656 34346 - 3.A.3.2.10
peptidase HRGMv2_0534_13 HRGMv2_0534_13_30 34378 35709 - M38.UNW
CAZyme HRGMv2_0534_13 HRGMv2_0534_13_31 35746 36492 - GT2
TF HRGMv2_0534_13 HRGMv2_0534_13_32 36673 36912 - HTH_3
CAZyme HRGMv2_0534_13 HRGMv2_0534_13_33 37054 38232 + GT19
STP HRGMv2_0534_13 HRGMv2_0534_13_34 38216 38869 + HD
pfam HRGMv2_0534_13 HRGMv2_0534_13_35 39138 40859 - Flg_new_2
TC HRGMv2_0534_13 HRGMv2_0534_13_36 41129 42832 + 3.A.24.3.1
Gene ID: HRGMv2_0534_13_29
Type: TC
Location: 31656 - 34346 (-)
Gene ID: HRGMv2_0534_13_30
Type: peptidase
Location: 34378 - 35709 (-)
Gene ID: HRGMv2_0534_13_31
Type: CAZyme
Location: 35746 - 36492 (-)
Gene ID: HRGMv2_0534_13_32
Type: TF
Location: 36673 - 36912 (-)
Gene ID: HRGMv2_0534_13_33
Type: CAZyme
Location: 37054 - 38232 (+)
Gene ID: HRGMv2_0534_13_34
Type: STP
Location: 38216 - 38869 (+)
Gene ID: HRGMv2_0534_13_35
Type: pfam
Location: 39138 - 40859 (-)
Gene ID: HRGMv2_0534_13_36
Type: TC
Location: 41129 - 42832 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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