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Cluster: HRGMv2_0531_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0531_7 HRGMv2_0531_7_26 29481 31010 + 3.A.11.1.1
pfam HRGMv2_0531_7 HRGMv2_0531_7_27 31024 31764 + PseudoU_synth_1 | PseudoU_synth_1
TC HRGMv2_0531_7 HRGMv2_0531_7_28 31785 32711 + 2.A.7.3.57
pfam HRGMv2_0531_7 HRGMv2_0531_7_29 32796 33683 + DHDPS
CAZyme HRGMv2_0531_7 HRGMv2_0531_7_30 33842 34453 - CE4
pfam HRGMv2_0531_7 HRGMv2_0531_7_31 34536 37880 - TMEM260-like
TC HRGMv2_0531_7 HRGMv2_0531_7_32 38010 38717 - 3.A.1.15.11
pfam HRGMv2_0531_7 HRGMv2_0531_7_33 38741 39574 - ZnuA
TC HRGMv2_0531_7 HRGMv2_0531_7_34 39578 40006 - 9.B.27.3.3
Gene ID: HRGMv2_0531_7_26
Type: TC
Location: 29481 - 31010 (+)
Gene ID: HRGMv2_0531_7_27
Type: pfam
Location: 31024 - 31764 (+)
Gene ID: HRGMv2_0531_7_28
Type: TC
Location: 31785 - 32711 (+)
Gene ID: HRGMv2_0531_7_29
Type: pfam
Location: 32796 - 33683 (+)
Gene ID: HRGMv2_0531_7_30
Type: CAZyme
Location: 33842 - 34453 (-)
Gene ID: HRGMv2_0531_7_31
Type: pfam
Location: 34536 - 37880 (-)
Gene ID: HRGMv2_0531_7_32
Type: TC
Location: 38010 - 38717 (-)
Gene ID: HRGMv2_0531_7_33
Type: pfam
Location: 38741 - 39574 (-)
Gene ID: HRGMv2_0531_7_34
Type: TC
Location: 39578 - 40006 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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