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Cluster: HRGMv2_0531_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0531_2 HRGMv2_0531_2_227 289057 290361 + 9.B.168.1.2
pfam HRGMv2_0531_2 HRGMv2_0531_2_228 290381 291493 + AAA_28
NULL(UNKNOWN) HRGMv2_0531_2 HRGMv2_0531_2_229 291482 292591 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0531_2 HRGMv2_0531_2_230 292604 293584 - GT2
CAZyme HRGMv2_0531_2 HRGMv2_0531_2_231 293539 294453 - GT2
TC HRGMv2_0531_2 HRGMv2_0531_2_232 294603 295973 + 2.A.62.1.3
pfam HRGMv2_0531_2 HRGMv2_0531_2_233 295996 296973 + PFK
TC HRGMv2_0531_2 HRGMv2_0531_2_234 297106 298632 + 3.A.2.1.2
pfam HRGMv2_0531_2 HRGMv2_0531_2_235 298661 298903 + ATP-synt_DE_N
NULL(UNKNOWN) HRGMv2_0531_2 HRGMv2_0531_2_236 298926 299375 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0531_2 HRGMv2_0531_2_237 299372 300412 + 3.A.2.1.7
Gene ID: HRGMv2_0531_2_227
Type: TC
Location: 289057 - 290361 (+)
Gene ID: HRGMv2_0531_2_228
Type: pfam
Location: 290381 - 291493 (+)
Gene ID: HRGMv2_0531_2_229
Type:
Location: 291482 - 292591 (-)
Gene ID: HRGMv2_0531_2_230
Type: CAZyme
Location: 292604 - 293584 (-)
Gene ID: HRGMv2_0531_2_231
Type: CAZyme
Location: 293539 - 294453 (-)
Gene ID: HRGMv2_0531_2_232
Type: TC
Location: 294603 - 295973 (+)
Gene ID: HRGMv2_0531_2_233
Type: pfam
Location: 295996 - 296973 (+)
Gene ID: HRGMv2_0531_2_234
Type: TC
Location: 297106 - 298632 (+)
Gene ID: HRGMv2_0531_2_235
Type: pfam
Location: 298661 - 298903 (+)
Gene ID: HRGMv2_0531_2_236
Type:
Location: 298926 - 299375 (+)
Gene ID: HRGMv2_0531_2_237
Type: TC
Location: 299372 - 300412 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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