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Cluster: HRGMv2_0531_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0531_2 HRGMv2_0531_2_112 139652 141952 + GH3
pfam HRGMv2_0531_2 HRGMv2_0531_2_113 142007 143020 + IU_nuc_hydro
pfam HRGMv2_0531_2 HRGMv2_0531_2_114 143058 144695 - DUF6377
TC HRGMv2_0531_2 HRGMv2_0531_2_115 144988 146451 + 2.A.47.1.12
pfam HRGMv2_0531_2 HRGMv2_0531_2_116 146744 151018 + CotH | CotH
NULL(UNKNOWN) HRGMv2_0531_2 HRGMv2_0531_2_117 151030 151221 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0531_2 HRGMv2_0531_2_118 151500 153446 + 3.A.1.120.6
peptidase HRGMv2_0531_2 HRGMv2_0531_2_119 153498 155531 + M13.UPW
TC HRGMv2_0531_2 HRGMv2_0531_2_120 155728 158529 + 1.B.14.6.1
TC HRGMv2_0531_2 HRGMv2_0531_2_121 158586 160184 + 8.A.46.1.1
Gene ID: HRGMv2_0531_2_112
Type: CAZyme
Location: 139652 - 141952 (+)
Gene ID: HRGMv2_0531_2_113
Type: pfam
Location: 142007 - 143020 (+)
Gene ID: HRGMv2_0531_2_114
Type: pfam
Location: 143058 - 144695 (-)
Gene ID: HRGMv2_0531_2_115
Type: TC
Location: 144988 - 146451 (+)
Gene ID: HRGMv2_0531_2_116
Type: pfam
Location: 146744 - 151018 (+)
Gene ID: HRGMv2_0531_2_117
Type:
Location: 151030 - 151221 (+)
Gene ID: HRGMv2_0531_2_118
Type: TC
Location: 151500 - 153446 (+)
Gene ID: HRGMv2_0531_2_119
Type: peptidase
Location: 153498 - 155531 (+)
Gene ID: HRGMv2_0531_2_120
Type: TC
Location: 155728 - 158529 (+)
Gene ID: HRGMv2_0531_2_121
Type: TC
Location: 158586 - 160184 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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