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Cluster: HRGMv2_0531_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0531_2 HRGMv2_0531_2_45 54200 56623 + 3.A.9.1.2
pfam HRGMv2_0531_2 HRGMv2_0531_2_46 56620 57267 + Leu_Phe_trans
TC HRGMv2_0531_2 HRGMv2_0531_2_47 57405 58946 + 1.B.3.1.7
peptidase HRGMv2_0531_2 HRGMv2_0531_2_48 59056 60240 + M75.UPW
pfam HRGMv2_0531_2 HRGMv2_0531_2_49 60331 62016 + DHOR
TC HRGMv2_0531_2 HRGMv2_0531_2_50 62096 64309 + 9.B.14.3.1
NULL(UNKNOWN) HRGMv2_0531_2 HRGMv2_0531_2_51 64606 64833 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0531_2 HRGMv2_0531_2_52 64855 69015 - GH105
Gene ID: HRGMv2_0531_2_45
Type: TC
Location: 54200 - 56623 (+)
Gene ID: HRGMv2_0531_2_46
Type: pfam
Location: 56620 - 57267 (+)
Gene ID: HRGMv2_0531_2_47
Type: TC
Location: 57405 - 58946 (+)
Gene ID: HRGMv2_0531_2_48
Type: peptidase
Location: 59056 - 60240 (+)
Gene ID: HRGMv2_0531_2_49
Type: pfam
Location: 60331 - 62016 (+)
Gene ID: HRGMv2_0531_2_50
Type: TC
Location: 62096 - 64309 (+)
Gene ID: HRGMv2_0531_2_51
Type:
Location: 64606 - 64833 (-)
Gene ID: HRGMv2_0531_2_52
Type: CAZyme
Location: 64855 - 69015 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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