dbCAN Logo

Cluster: HRGMv2_0526_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0526_35 HRGMv2_0526_35_31 37773 39164 + 2.A.1.10.2
pfam HRGMv2_0526_35 HRGMv2_0526_35_32 39184 39903 + Methyltrans_RNA | PUA_4
TC HRGMv2_0526_35 HRGMv2_0526_35_33 40009 40977 - 2.A.19.5.2
CAZyme HRGMv2_0526_35 HRGMv2_0526_35_34 41040 42119 - GT4
CAZyme HRGMv2_0526_35 HRGMv2_0526_35_35 42154 43191 - GT4
pfam HRGMv2_0526_35 HRGMv2_0526_35_36 43304 44401 - APH
CAZyme HRGMv2_0526_35 HRGMv2_0526_35_37 44417 45670 - GT4
NULL(UNKNOWN) HRGMv2_0526_35 HRGMv2_0526_35_38 45667 46995 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0526_35 HRGMv2_0526_35_39 47009 47971 - GT2
Gene ID: HRGMv2_0526_35_31
Type: TC
Location: 37773 - 39164 (+)
Gene ID: HRGMv2_0526_35_32
Type: pfam
Location: 39184 - 39903 (+)
Gene ID: HRGMv2_0526_35_33
Type: TC
Location: 40009 - 40977 (-)
Gene ID: HRGMv2_0526_35_34
Type: CAZyme
Location: 41040 - 42119 (-)
Gene ID: HRGMv2_0526_35_35
Type: CAZyme
Location: 42154 - 43191 (-)
Gene ID: HRGMv2_0526_35_36
Type: pfam
Location: 43304 - 44401 (-)
Gene ID: HRGMv2_0526_35_37
Type: CAZyme
Location: 44417 - 45670 (-)
Gene ID: HRGMv2_0526_35_38
Type:
Location: 45667 - 46995 (-)
Gene ID: HRGMv2_0526_35_39
Type: CAZyme
Location: 47009 - 47971 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List