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Cluster: HRGMv2_0526_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0526_34 HRGMv2_0526_34_38 37429 39837 - GH119
pfam HRGMv2_0526_34 HRGMv2_0526_34_39 40182 41456 + AAA_21
pfam HRGMv2_0526_34 HRGMv2_0526_34_40 41463 42071 + RloB
TC HRGMv2_0526_34 HRGMv2_0526_34_41 42120 43982 - 1.B.14.1.13
pfam HRGMv2_0526_34 HRGMv2_0526_34_42 43988 44980 - DUF362 | Lar_N
TC HRGMv2_0526_34 HRGMv2_0526_34_43 45216 46673 + 2.A.35.1.1
TC HRGMv2_0526_34 HRGMv2_0526_34_44 46701 47468 + 1.B.44.1.1
pfam HRGMv2_0526_34 HRGMv2_0526_34_45 47472 48500 + PorP_SprF
TC HRGMv2_0526_34 HRGMv2_0526_34_46 48511 49956 + 9.A.25.1.1
pfam HRGMv2_0526_34 HRGMv2_0526_34_47 50019 50984 + GldL_N
TC HRGMv2_0526_34 HRGMv2_0526_34_48 50984 52546 + 9.A.25.1.1
Gene ID: HRGMv2_0526_34_38
Type: CAZyme
Location: 37429 - 39837 (-)
Gene ID: HRGMv2_0526_34_39
Type: pfam
Location: 40182 - 41456 (+)
Gene ID: HRGMv2_0526_34_40
Type: pfam
Location: 41463 - 42071 (+)
Gene ID: HRGMv2_0526_34_41
Type: TC
Location: 42120 - 43982 (-)
Gene ID: HRGMv2_0526_34_42
Type: pfam
Location: 43988 - 44980 (-)
Gene ID: HRGMv2_0526_34_43
Type: TC
Location: 45216 - 46673 (+)
Gene ID: HRGMv2_0526_34_44
Type: TC
Location: 46701 - 47468 (+)
Gene ID: HRGMv2_0526_34_45
Type: pfam
Location: 47472 - 48500 (+)
Gene ID: HRGMv2_0526_34_46
Type: TC
Location: 48511 - 49956 (+)
Gene ID: HRGMv2_0526_34_47
Type: pfam
Location: 50019 - 50984 (+)
Gene ID: HRGMv2_0526_34_48
Type: TC
Location: 50984 - 52546 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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