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Cluster: HRGMv2_0526_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0526_17 HRGMv2_0526_17_188 212846 214867 + GH13_8
CAZyme HRGMv2_0526_17 HRGMv2_0526_17_189 214867 215982 + GT19
pfam HRGMv2_0526_17 HRGMv2_0526_17_190 216053 216334 + PQ-loop
TC HRGMv2_0526_17 HRGMv2_0526_17_191 216351 217004 + 2.A.115.2.14
pfam HRGMv2_0526_17 HRGMv2_0526_17_192 216955 218022 + FAD_binding_4 | MurB_C
STP HRGMv2_0526_17 HRGMv2_0526_17_193 218055 219386 + EPSP_synthase
CAZyme HRGMv2_0526_17 HRGMv2_0526_17_194 219491 222277 - GH13
Gene ID: HRGMv2_0526_17_188
Type: CAZyme
Location: 212846 - 214867 (+)
Gene ID: HRGMv2_0526_17_189
Type: CAZyme
Location: 214867 - 215982 (+)
Gene ID: HRGMv2_0526_17_190
Type: pfam
Location: 216053 - 216334 (+)
Gene ID: HRGMv2_0526_17_191
Type: TC
Location: 216351 - 217004 (+)
Gene ID: HRGMv2_0526_17_192
Type: pfam
Location: 216955 - 218022 (+)
Gene ID: HRGMv2_0526_17_193
Type: STP
Location: 218055 - 219386 (+)
Gene ID: HRGMv2_0526_17_194
Type: CAZyme
Location: 219491 - 222277 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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