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Cluster: HRGMv2_0505_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0505_3 HRGMv2_0505_3_1 140 2647 + 1.B.18.1.2
pfam HRGMv2_0505_3 HRGMv2_0505_3_2 2899 3927 + Wzz | GNVR
TC HRGMv2_0505_3 HRGMv2_0505_3_3 3954 5198 + 2.A.66.2.1
NULL(UNKNOWN) HRGMv2_0505_3 HRGMv2_0505_3_4 5195 6391 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0505_3 HRGMv2_0505_3_5 6375 7289 + GT2
CAZyme HRGMv2_0505_3 HRGMv2_0505_3_6 7286 8161 + GT2
CAZyme HRGMv2_0505_3 HRGMv2_0505_3_7 8158 9255 + GT4
CAZyme HRGMv2_0505_3 HRGMv2_0505_3_8 9252 10439 - GT4
TC HRGMv2_0505_3 HRGMv2_0505_3_9 10539 11663 + 9.B.146.1.4
TC HRGMv2_0505_3 HRGMv2_0505_3_10 11660 12232 + 9.B.18.1.3
STP HRGMv2_0505_3 HRGMv2_0505_3_11 12532 13509 - Glucokinase
TC HRGMv2_0505_3 HRGMv2_0505_3_12 13687 14361 + 2.A.76.1.6
Gene ID: HRGMv2_0505_3_1
Type: TC
Location: 140 - 2647 (+)
Gene ID: HRGMv2_0505_3_2
Type: pfam
Location: 2899 - 3927 (+)
Gene ID: HRGMv2_0505_3_3
Type: TC
Location: 3954 - 5198 (+)
Gene ID: HRGMv2_0505_3_4
Type:
Location: 5195 - 6391 (+)
Gene ID: HRGMv2_0505_3_5
Type: CAZyme
Location: 6375 - 7289 (+)
Gene ID: HRGMv2_0505_3_6
Type: CAZyme
Location: 7286 - 8161 (+)
Gene ID: HRGMv2_0505_3_7
Type: CAZyme
Location: 8158 - 9255 (+)
Gene ID: HRGMv2_0505_3_8
Type: CAZyme
Location: 9252 - 10439 (-)
Gene ID: HRGMv2_0505_3_9
Type: TC
Location: 10539 - 11663 (+)
Gene ID: HRGMv2_0505_3_10
Type: TC
Location: 11660 - 12232 (+)
Gene ID: HRGMv2_0505_3_11
Type: STP
Location: 12532 - 13509 (-)
Gene ID: HRGMv2_0505_3_12
Type: TC
Location: 13687 - 14361 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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