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Cluster: HRGMv2_0505_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0505_2 HRGMv2_0505_2_54 66938 70096 + 1.B.14.6.1
pfam HRGMv2_0505_2 HRGMv2_0505_2_55 70113 72155 + SusD_RagB | SusD-like_3
TC HRGMv2_0505_2 HRGMv2_0505_2_56 72205 75027 + 1.B.14.6.1
pfam HRGMv2_0505_2 HRGMv2_0505_2_57 75048 76787 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0505_2 HRGMv2_0505_2_58 76861 78195 + PL9_1
CAZyme HRGMv2_0505_2 HRGMv2_0505_2_59 78405 79739 - GH28
NULL(UNKNOWN) HRGMv2_0505_2 HRGMv2_0505_2_60 79756 79890 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0505_2 HRGMv2_0505_2_61 79955 83140 + 1.B.14.6.1
Gene ID: HRGMv2_0505_2_54
Type: TC
Location: 66938 - 70096 (+)
Gene ID: HRGMv2_0505_2_55
Type: pfam
Location: 70113 - 72155 (+)
Gene ID: HRGMv2_0505_2_56
Type: TC
Location: 72205 - 75027 (+)
Gene ID: HRGMv2_0505_2_57
Type: pfam
Location: 75048 - 76787 (+)
Gene ID: HRGMv2_0505_2_58
Type: CAZyme
Location: 76861 - 78195 (+)
Gene ID: HRGMv2_0505_2_59
Type: CAZyme
Location: 78405 - 79739 (-)
Gene ID: HRGMv2_0505_2_60
Type:
Location: 79756 - 79890 (-)
Gene ID: HRGMv2_0505_2_61
Type: TC
Location: 79955 - 83140 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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