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Cluster: HRGMv2_0505_CGC63

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0505_59 HRGMv2_0505_59_1 258 1010 + 9.B.158.1.1
peptidase HRGMv2_0505_59 HRGMv2_0505_59_2 1007 3886 + M16.UPW
CAZyme HRGMv2_0505_59 HRGMv2_0505_59_3 3934 5142 - GT30
pfam HRGMv2_0505_59 HRGMv2_0505_59_4 5185 6714 - tRNA-synt_1c | Anticodon_2
STP HRGMv2_0505_59 HRGMv2_0505_59_5 6827 8905 + HD
TC HRGMv2_0505_59 HRGMv2_0505_59_6 8934 11204 - 3.A.11.3.1
pfam HRGMv2_0505_59 HRGMv2_0505_59_7 11204 11800 - OMP_b-brl | OMP_b-brl_2
pfam HRGMv2_0505_59 HRGMv2_0505_59_8 11851 12885 - GldN
TC HRGMv2_0505_59 HRGMv2_0505_59_9 12906 14459 - 9.A.25.1.1
pfam HRGMv2_0505_59 HRGMv2_0505_59_10 14466 15257 - GldL_N
TC HRGMv2_0505_59 HRGMv2_0505_59_11 15254 16714 - 9.A.25.1.1
Gene ID: HRGMv2_0505_59_1
Type: TC
Location: 258 - 1010 (+)
Gene ID: HRGMv2_0505_59_2
Type: peptidase
Location: 1007 - 3886 (+)
Gene ID: HRGMv2_0505_59_3
Type: CAZyme
Location: 3934 - 5142 (-)
Gene ID: HRGMv2_0505_59_4
Type: pfam
Location: 5185 - 6714 (-)
Gene ID: HRGMv2_0505_59_5
Type: STP
Location: 6827 - 8905 (+)
Gene ID: HRGMv2_0505_59_6
Type: TC
Location: 8934 - 11204 (-)
Gene ID: HRGMv2_0505_59_7
Type: pfam
Location: 11204 - 11800 (-)
Gene ID: HRGMv2_0505_59_8
Type: pfam
Location: 11851 - 12885 (-)
Gene ID: HRGMv2_0505_59_9
Type: TC
Location: 12906 - 14459 (-)
Gene ID: HRGMv2_0505_59_10
Type: pfam
Location: 14466 - 15257 (-)
Gene ID: HRGMv2_0505_59_11
Type: TC
Location: 15254 - 16714 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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