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Cluster: HRGMv2_0505_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0505_49 HRGMv2_0505_49_8 7669 9096 - CE20
pfam HRGMv2_0505_49 HRGMv2_0505_49_9 9185 10369 - AhpC-TSA | Redoxin | Thioredoxin_8 | DUF4369
TC HRGMv2_0505_49 HRGMv2_0505_49_10 10436 10813 - 1.A.43.1.6
pfam HRGMv2_0505_49 HRGMv2_0505_49_11 10962 13319 + KH_1 | S1 | RNase_PH | RNase_PH | RNase_PH_C | RNase_PH_C | PNPase
CAZyme HRGMv2_0505_49 HRGMv2_0505_49_12 13407 14774 - GH29
STP HRGMv2_0505_49 HRGMv2_0505_49_13 14786 15682 - HTH_18
CAZyme HRGMv2_0505_49 HRGMv2_0505_49_14 15937 19749 - GH31_18
CAZyme HRGMv2_0505_49 HRGMv2_0505_49_15 19749 21617 - GH35
Gene ID: HRGMv2_0505_49_8
Type: CAZyme
Location: 7669 - 9096 (-)
Gene ID: HRGMv2_0505_49_9
Type: pfam
Location: 9185 - 10369 (-)
Gene ID: HRGMv2_0505_49_10
Type: TC
Location: 10436 - 10813 (-)
Gene ID: HRGMv2_0505_49_11
Type: pfam
Location: 10962 - 13319 (+)
Gene ID: HRGMv2_0505_49_12
Type: CAZyme
Location: 13407 - 14774 (-)
Gene ID: HRGMv2_0505_49_13
Type: STP
Location: 14786 - 15682 (-)
Gene ID: HRGMv2_0505_49_14
Type: CAZyme
Location: 15937 - 19749 (-)
Gene ID: HRGMv2_0505_49_15
Type: CAZyme
Location: 19749 - 21617 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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