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Cluster: HRGMv2_0505_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0505_37 HRGMv2_0505_37_9 13692 15986 + PL40 | PL40
CAZyme HRGMv2_0505_37 HRGMv2_0505_37_10 15998 17908 + GH97
NULL(UNKNOWN) HRGMv2_0505_37 HRGMv2_0505_37_11 17905 19308 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0505_37 HRGMv2_0505_37_12 19318 20520 + GH88
NULL(UNKNOWN) HRGMv2_0505_37 HRGMv2_0505_37_13 20608 20700 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0505_37 HRGMv2_0505_37_14 20713 21231 + GerE
TC HRGMv2_0505_37 HRGMv2_0505_37_15 21273 24530 + 1.B.14.6.1
pfam HRGMv2_0505_37 HRGMv2_0505_37_16 24577 26511 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0505_37 HRGMv2_0505_37_17 26626 28032 + GH28
Gene ID: HRGMv2_0505_37_9
Type: CAZyme
Location: 13692 - 15986 (+)
Gene ID: HRGMv2_0505_37_10
Type: CAZyme
Location: 15998 - 17908 (+)
Gene ID: HRGMv2_0505_37_11
Type:
Location: 17905 - 19308 (+)
Gene ID: HRGMv2_0505_37_12
Type: CAZyme
Location: 19318 - 20520 (+)
Gene ID: HRGMv2_0505_37_13
Type:
Location: 20608 - 20700 (+)
Gene ID: HRGMv2_0505_37_14
Type: TF
Location: 20713 - 21231 (+)
Gene ID: HRGMv2_0505_37_15
Type: TC
Location: 21273 - 24530 (+)
Gene ID: HRGMv2_0505_37_16
Type: pfam
Location: 24577 - 26511 (+)
Gene ID: HRGMv2_0505_37_17
Type: CAZyme
Location: 26626 - 28032 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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