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Cluster: HRGMv2_0505_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0505_2 HRGMv2_0505_2_1 205 2646 - GH94
CAZyme HRGMv2_0505_2 HRGMv2_0505_2_2 2846 4123 + CE7
CAZyme HRGMv2_0505_2 HRGMv2_0505_2_3 4139 5221 + GH26
CAZyme HRGMv2_0505_2 HRGMv2_0505_2_4 5245 6417 + GH130_1
TC HRGMv2_0505_2 HRGMv2_0505_2_5 6487 7875 + 2.A.2.3.7
pfam HRGMv2_0505_2 HRGMv2_0505_2_6 7936 9096 + GlcNAc_2-epim
NULL(UNKNOWN) HRGMv2_0505_2 HRGMv2_0505_2_7 9402 9527 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0505_2 HRGMv2_0505_2_8 9524 9877 + 3.D.1.8.1
TC HRGMv2_0505_2 HRGMv2_0505_2_9 9868 10608 + 3.D.1.6.1
TC HRGMv2_0505_2 HRGMv2_0505_2_10 10625 12196 + 3.D.1.5.1
TC HRGMv2_0505_2 HRGMv2_0505_2_11 12199 13284 + 3.D.1.5.1
STP HRGMv2_0505_2 HRGMv2_0505_2_12 13295 13879 + Fer4
TC HRGMv2_0505_2 HRGMv2_0505_2_13 13911 14417 + 3.D.9.1.1
TC HRGMv2_0505_2 HRGMv2_0505_2_14 14414 14722 + 3.D.1.2.1
TC HRGMv2_0505_2 HRGMv2_0505_2_15 14729 16723 + 3.D.1.2.1
TC HRGMv2_0505_2 HRGMv2_0505_2_16 16742 18244 + 3.D.1.2.1
TC HRGMv2_0505_2 HRGMv2_0505_2_17 18260 19717 + 3.D.9.1.1
NULL(UNKNOWN) HRGMv2_0505_2 HRGMv2_0505_2_18 19763 19885 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0505_2 HRGMv2_0505_2_19 19916 21220 + 2.A.66.1.4
NULL(UNKNOWN) HRGMv2_0505_2 HRGMv2_0505_2_20 21355 21759 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0505_2 HRGMv2_0505_2_21 21806 24829 + 2.A.6.1.8
TC HRGMv2_0505_2 HRGMv2_0505_2_22 24811 25368 + 2.A.6.1.8
pfam HRGMv2_0505_2 HRGMv2_0505_2_23 25365 26639 + OEP | OEP
TC HRGMv2_0505_2 HRGMv2_0505_2_24 26668 27915 + 2.A.6.1.10
Gene ID: HRGMv2_0505_2_1
Type: CAZyme
Location: 205 - 2646 (-)
Gene ID: HRGMv2_0505_2_2
Type: CAZyme
Location: 2846 - 4123 (+)
Gene ID: HRGMv2_0505_2_3
Type: CAZyme
Location: 4139 - 5221 (+)
Gene ID: HRGMv2_0505_2_4
Type: CAZyme
Location: 5245 - 6417 (+)
Gene ID: HRGMv2_0505_2_5
Type: TC
Location: 6487 - 7875 (+)
Gene ID: HRGMv2_0505_2_6
Type: pfam
Location: 7936 - 9096 (+)
Gene ID: HRGMv2_0505_2_7
Type:
Location: 9402 - 9527 (+)
Gene ID: HRGMv2_0505_2_8
Type: TC
Location: 9524 - 9877 (+)
Gene ID: HRGMv2_0505_2_9
Type: TC
Location: 9868 - 10608 (+)
Gene ID: HRGMv2_0505_2_10
Type: TC
Location: 10625 - 12196 (+)
Gene ID: HRGMv2_0505_2_11
Type: TC
Location: 12199 - 13284 (+)
Gene ID: HRGMv2_0505_2_12
Type: STP
Location: 13295 - 13879 (+)
Gene ID: HRGMv2_0505_2_13
Type: TC
Location: 13911 - 14417 (+)
Gene ID: HRGMv2_0505_2_14
Type: TC
Location: 14414 - 14722 (+)
Gene ID: HRGMv2_0505_2_15
Type: TC
Location: 14729 - 16723 (+)
Gene ID: HRGMv2_0505_2_16
Type: TC
Location: 16742 - 18244 (+)
Gene ID: HRGMv2_0505_2_17
Type: TC
Location: 18260 - 19717 (+)
Gene ID: HRGMv2_0505_2_18
Type:
Location: 19763 - 19885 (-)
Gene ID: HRGMv2_0505_2_19
Type: TC
Location: 19916 - 21220 (+)
Gene ID: HRGMv2_0505_2_20
Type:
Location: 21355 - 21759 (+)
Gene ID: HRGMv2_0505_2_21
Type: TC
Location: 21806 - 24829 (+)
Gene ID: HRGMv2_0505_2_22
Type: TC
Location: 24811 - 25368 (+)
Gene ID: HRGMv2_0505_2_23
Type: pfam
Location: 25365 - 26639 (+)
Gene ID: HRGMv2_0505_2_24
Type: TC
Location: 26668 - 27915 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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