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Cluster: HRGMv2_0505_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0505_25 HRGMv2_0505_25_10 13501 14856 + CBM50
pfam HRGMv2_0505_25 HRGMv2_0505_25_11 14862 15605 + OMP_b-brl_2
TC HRGMv2_0505_25 HRGMv2_0505_25_12 15648 17162 + 2.A.17.1.6
TC HRGMv2_0505_25 HRGMv2_0505_25_13 17311 18759 - 2.A.1.53.5
peptidase HRGMv2_0505_25 HRGMv2_0505_25_14 18799 20970 - S09.UPC
TC HRGMv2_0505_25 HRGMv2_0505_25_15 21044 22969 - 2.A.9.3.1
peptidase HRGMv2_0505_25 HRGMv2_0505_25_16 22969 24576 - C26.964
TC HRGMv2_0505_25 HRGMv2_0505_25_17 24680 26053 + 9.B.168.1.2
pfam HRGMv2_0505_25 HRGMv2_0505_25_18 26235 26702 - DUF1573 | HYDIN_VesB_CFA65-like_Ig
CAZyme HRGMv2_0505_25 HRGMv2_0505_25_19 26747 27871 - GH105
Gene ID: HRGMv2_0505_25_10
Type: CAZyme
Location: 13501 - 14856 (+)
Gene ID: HRGMv2_0505_25_11
Type: pfam
Location: 14862 - 15605 (+)
Gene ID: HRGMv2_0505_25_12
Type: TC
Location: 15648 - 17162 (+)
Gene ID: HRGMv2_0505_25_13
Type: TC
Location: 17311 - 18759 (-)
Gene ID: HRGMv2_0505_25_14
Type: peptidase
Location: 18799 - 20970 (-)
Gene ID: HRGMv2_0505_25_15
Type: TC
Location: 21044 - 22969 (-)
Gene ID: HRGMv2_0505_25_16
Type: peptidase
Location: 22969 - 24576 (-)
Gene ID: HRGMv2_0505_25_17
Type: TC
Location: 24680 - 26053 (+)
Gene ID: HRGMv2_0505_25_18
Type: pfam
Location: 26235 - 26702 (-)
Gene ID: HRGMv2_0505_25_19
Type: CAZyme
Location: 26747 - 27871 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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