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Cluster: HRGMv2_0505_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0505_16 HRGMv2_0505_16_26 28516 30225 + 2.A.58.2.2
CAZyme HRGMv2_0505_16 HRGMv2_0505_16_27 30297 31697 + GH105
pfam HRGMv2_0505_16 HRGMv2_0505_16_28 31694 32104 - TM1506
CAZyme HRGMv2_0505_16 HRGMv2_0505_16_29 32348 33346 - GH43_31
CAZyme HRGMv2_0505_16 HRGMv2_0505_16_30 33357 35360 - GH182
TF HRGMv2_0505_16 HRGMv2_0505_16_31 35487 39512 - HTH_AraC
CAZyme HRGMv2_0505_16 HRGMv2_0505_16_32 39519 40538 - GH43_3
sulfatase HRGMv2_0505_16 HRGMv2_0505_16_33 40531 42543 - S1_4
CAZyme HRGMv2_0505_16 HRGMv2_0505_16_34 42672 43787 - GH105
CAZyme HRGMv2_0505_16 HRGMv2_0505_16_35 43807 46746 - GH115
Gene ID: HRGMv2_0505_16_26
Type: TC
Location: 28516 - 30225 (+)
Gene ID: HRGMv2_0505_16_27
Type: CAZyme
Location: 30297 - 31697 (+)
Gene ID: HRGMv2_0505_16_28
Type: pfam
Location: 31694 - 32104 (-)
Gene ID: HRGMv2_0505_16_29
Type: CAZyme
Location: 32348 - 33346 (-)
Gene ID: HRGMv2_0505_16_30
Type: CAZyme
Location: 33357 - 35360 (-)
Gene ID: HRGMv2_0505_16_31
Type: TF
Location: 35487 - 39512 (-)
Gene ID: HRGMv2_0505_16_32
Type: CAZyme
Location: 39519 - 40538 (-)
Gene ID: HRGMv2_0505_16_33
Type: sulfatase
Location: 40531 - 42543 (-)
Gene ID: HRGMv2_0505_16_34
Type: CAZyme
Location: 42672 - 43787 (-)
Gene ID: HRGMv2_0505_16_35
Type: CAZyme
Location: 43807 - 46746 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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