dbCAN Logo

Cluster: HRGMv2_0505_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0505_13 HRGMv2_0505_13_37 43598 44596 - GH130_2
TF HRGMv2_0505_13 HRGMv2_0505_13_38 44894 46099 + MarR
pfam HRGMv2_0505_13 HRGMv2_0505_13_39 46441 47625 + GlcNAc_2-epim
CAZyme HRGMv2_0505_13 HRGMv2_0505_13_40 47664 48878 - GH109
pfam HRGMv2_0505_13 HRGMv2_0505_13_41 48977 50596 + PseudoU_synth_2
TC HRGMv2_0505_13 HRGMv2_0505_13_42 50593 52254 - 2.A.81.1.2
NULL(UNKNOWN) HRGMv2_0505_13 HRGMv2_0505_13_43 52332 52733 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0505_13 HRGMv2_0505_13_44 52776 54800 - AAA_11 | AAA_12 | AAA_19 | AAA_30
TC HRGMv2_0505_13 HRGMv2_0505_13_45 54822 55604 + 3.A.1.13.2
Gene ID: HRGMv2_0505_13_37
Type: CAZyme
Location: 43598 - 44596 (-)
Gene ID: HRGMv2_0505_13_38
Type: TF
Location: 44894 - 46099 (+)
Gene ID: HRGMv2_0505_13_39
Type: pfam
Location: 46441 - 47625 (+)
Gene ID: HRGMv2_0505_13_40
Type: CAZyme
Location: 47664 - 48878 (-)
Gene ID: HRGMv2_0505_13_41
Type: pfam
Location: 48977 - 50596 (+)
Gene ID: HRGMv2_0505_13_42
Type: TC
Location: 50593 - 52254 (-)
Gene ID: HRGMv2_0505_13_43
Type:
Location: 52332 - 52733 (-)
Gene ID: HRGMv2_0505_13_44
Type: pfam
Location: 52776 - 54800 (-)
Gene ID: HRGMv2_0505_13_45
Type: TC
Location: 54822 - 55604 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List