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Cluster: HRGMv2_0505_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0505_13 HRGMv2_0505_13_25 27075 29303 - GH3
CAZyme HRGMv2_0505_13 HRGMv2_0505_13_26 29300 30547 - GH5_46
pfam HRGMv2_0505_13 HRGMv2_0505_13_27 30560 32140 - SusD_RagB | SusD-like_3
TC HRGMv2_0505_13 HRGMv2_0505_13_28 32155 35304 - 1.B.14.6.1
CAZyme HRGMv2_0505_13 HRGMv2_0505_13_29 35621 37681 + PL8
pfam HRGMv2_0505_13 HRGMv2_0505_13_30 37706 38980 - Lactamase_B
NULL(UNKNOWN) HRGMv2_0505_13 HRGMv2_0505_13_31 39006 39200 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0505_13 HRGMv2_0505_13_32 39193 41070 + 3.A.16.1.1
Gene ID: HRGMv2_0505_13_25
Type: CAZyme
Location: 27075 - 29303 (-)
Gene ID: HRGMv2_0505_13_26
Type: CAZyme
Location: 29300 - 30547 (-)
Gene ID: HRGMv2_0505_13_27
Type: pfam
Location: 30560 - 32140 (-)
Gene ID: HRGMv2_0505_13_28
Type: TC
Location: 32155 - 35304 (-)
Gene ID: HRGMv2_0505_13_29
Type: CAZyme
Location: 35621 - 37681 (+)
Gene ID: HRGMv2_0505_13_30
Type: pfam
Location: 37706 - 38980 (-)
Gene ID: HRGMv2_0505_13_31
Type:
Location: 39006 - 39200 (+)
Gene ID: HRGMv2_0505_13_32
Type: TC
Location: 39193 - 41070 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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