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Cluster: HRGMv2_0505_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0505_12 HRGMv2_0505_12_34 34010 34954 + CBM50
CAZyme HRGMv2_0505_12 HRGMv2_0505_12_35 35022 36104 - GH33
CAZyme HRGMv2_0505_12 HRGMv2_0505_12_36 36111 36887 - GT2
CAZyme HRGMv2_0505_12 HRGMv2_0505_12_37 36884 38158 - GT4
NULL(UNKNOWN) HRGMv2_0505_12 HRGMv2_0505_12_38 39325 39672 + NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_0505_12 HRGMv2_0505_12_39 39910 43620 + C56.972
TC HRGMv2_0505_12 HRGMv2_0505_12_40 43639 44184 + 2.A.51.1.6
TC HRGMv2_0505_12 HRGMv2_0505_12_41 44184 44759 + 2.A.51.1.6
pfam HRGMv2_0505_12 HRGMv2_0505_12_42 44761 45651 + EamA | EamA
CAZyme HRGMv2_0505_12 HRGMv2_0505_12_43 45692 47569 - GH13_46
CAZyme HRGMv2_0505_12 HRGMv2_0505_12_44 47600 49537 - GH13_14
CAZyme HRGMv2_0505_12 HRGMv2_0505_12_45 49633 51765 - GH97
CAZyme HRGMv2_0505_12 HRGMv2_0505_12_46 51783 54482 - GH77
TC HRGMv2_0505_12 HRGMv2_0505_12_47 54700 56004 - 2.A.2.6.2
TF HRGMv2_0505_12 HRGMv2_0505_12_48 56027 57052 - LacI
TC HRGMv2_0505_12 HRGMv2_0505_12_49 57442 60573 + 1.B.14.6.1
Gene ID: HRGMv2_0505_12_34
Type: CAZyme
Location: 34010 - 34954 (+)
Gene ID: HRGMv2_0505_12_35
Type: CAZyme
Location: 35022 - 36104 (-)
Gene ID: HRGMv2_0505_12_36
Type: CAZyme
Location: 36111 - 36887 (-)
Gene ID: HRGMv2_0505_12_37
Type: CAZyme
Location: 36884 - 38158 (-)
Gene ID: HRGMv2_0505_12_38
Type:
Location: 39325 - 39672 (+)
Gene ID: HRGMv2_0505_12_39
Type: peptidase
Location: 39910 - 43620 (+)
Gene ID: HRGMv2_0505_12_40
Type: TC
Location: 43639 - 44184 (+)
Gene ID: HRGMv2_0505_12_41
Type: TC
Location: 44184 - 44759 (+)
Gene ID: HRGMv2_0505_12_42
Type: pfam
Location: 44761 - 45651 (+)
Gene ID: HRGMv2_0505_12_43
Type: CAZyme
Location: 45692 - 47569 (-)
Gene ID: HRGMv2_0505_12_44
Type: CAZyme
Location: 47600 - 49537 (-)
Gene ID: HRGMv2_0505_12_45
Type: CAZyme
Location: 49633 - 51765 (-)
Gene ID: HRGMv2_0505_12_46
Type: CAZyme
Location: 51783 - 54482 (-)
Gene ID: HRGMv2_0505_12_47
Type: TC
Location: 54700 - 56004 (-)
Gene ID: HRGMv2_0505_12_48
Type: TF
Location: 56027 - 57052 (-)
Gene ID: HRGMv2_0505_12_49
Type: TC
Location: 57442 - 60573 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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