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Cluster: HRGMv2_0505_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0505_10 HRGMv2_0505_10_10 11238 12416 + 2.A.1.7.17
STP HRGMv2_0505_10 HRGMv2_0505_10_11 12435 13316 + PfkB
TC HRGMv2_0505_10 HRGMv2_0505_10_12 13564 16680 + 1.B.14.6.1
pfam HRGMv2_0505_10 HRGMv2_0505_10_13 16721 18460 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0505_10 HRGMv2_0505_10_14 18450 20192 + GH32
STP HRGMv2_0505_10 HRGMv2_0505_10_15 20765 21163 + Rhodanese
NULL(UNKNOWN) HRGMv2_0505_10 HRGMv2_0505_10_16 21184 21363 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0505_10 HRGMv2_0505_10_17 21407 23563 - GH3
NULL(UNKNOWN) HRGMv2_0505_10 HRGMv2_0505_10_18 24149 24871 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_0505_10 HRGMv2_0505_10_19 25009 26838 - M06.UPW
TC HRGMv2_0505_10 HRGMv2_0505_10_20 26883 28871 + 2.A.67.4.2
Gene ID: HRGMv2_0505_10_10
Type: TC
Location: 11238 - 12416 (+)
Gene ID: HRGMv2_0505_10_11
Type: STP
Location: 12435 - 13316 (+)
Gene ID: HRGMv2_0505_10_12
Type: TC
Location: 13564 - 16680 (+)
Gene ID: HRGMv2_0505_10_13
Type: pfam
Location: 16721 - 18460 (+)
Gene ID: HRGMv2_0505_10_14
Type: CAZyme
Location: 18450 - 20192 (+)
Gene ID: HRGMv2_0505_10_15
Type: STP
Location: 20765 - 21163 (+)
Gene ID: HRGMv2_0505_10_16
Type:
Location: 21184 - 21363 (-)
Gene ID: HRGMv2_0505_10_17
Type: CAZyme
Location: 21407 - 23563 (-)
Gene ID: HRGMv2_0505_10_18
Type:
Location: 24149 - 24871 (-)
Gene ID: HRGMv2_0505_10_19
Type: peptidase
Location: 25009 - 26838 (-)
Gene ID: HRGMv2_0505_10_20
Type: TC
Location: 26883 - 28871 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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