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Cluster: HRGMv2_0505_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0505_7 HRGMv2_0505_7_32 41703 42869 + 3.D.5.1.1
pfam HRGMv2_0505_7 HRGMv2_0505_7_33 42874 43605 + FMN_bind
TC HRGMv2_0505_7 HRGMv2_0505_7_34 43608 44237 + 3.D.5.1.1
TC HRGMv2_0505_7 HRGMv2_0505_7_35 44237 44863 + 3.D.5.1.1
TC HRGMv2_0505_7 HRGMv2_0505_7_36 44882 46150 + 3.D.5.1.1
TF HRGMv2_0505_7 HRGMv2_0505_7_37 47459 51478 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_0505_7 HRGMv2_0505_7_38 51626 53353 + GT83
CAZyme HRGMv2_0505_7 HRGMv2_0505_7_39 53346 54080 + GT2
TC HRGMv2_0505_7 HRGMv2_0505_7_40 54107 54742 + 2.A.123.4.1
NULL(UNKNOWN) HRGMv2_0505_7 HRGMv2_0505_7_41 54811 55911 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0505_7 HRGMv2_0505_7_42 55916 57115 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0505_7 HRGMv2_0505_7_43 57112 58428 + 1.I.1.1.3
Gene ID: HRGMv2_0505_7_32
Type: TC
Location: 41703 - 42869 (+)
Gene ID: HRGMv2_0505_7_33
Type: pfam
Location: 42874 - 43605 (+)
Gene ID: HRGMv2_0505_7_34
Type: TC
Location: 43608 - 44237 (+)
Gene ID: HRGMv2_0505_7_35
Type: TC
Location: 44237 - 44863 (+)
Gene ID: HRGMv2_0505_7_36
Type: TC
Location: 44882 - 46150 (+)
Gene ID: HRGMv2_0505_7_37
Type: TF
Location: 47459 - 51478 (+)
Gene ID: HRGMv2_0505_7_38
Type: CAZyme
Location: 51626 - 53353 (+)
Gene ID: HRGMv2_0505_7_39
Type: CAZyme
Location: 53346 - 54080 (+)
Gene ID: HRGMv2_0505_7_40
Type: TC
Location: 54107 - 54742 (+)
Gene ID: HRGMv2_0505_7_41
Type:
Location: 54811 - 55911 (+)
Gene ID: HRGMv2_0505_7_42
Type:
Location: 55916 - 57115 (+)
Gene ID: HRGMv2_0505_7_43
Type: TC
Location: 57112 - 58428 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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