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Cluster: HRGMv2_0505_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0505_5 HRGMv2_0505_5_68 93082 95100 + 3.D.1.5.1
TC HRGMv2_0505_5 HRGMv2_0505_5_69 95153 95659 + 3.D.1.5.1
TC HRGMv2_0505_5 HRGMv2_0505_5_70 95671 97437 + 3.D.1.6.3
TC HRGMv2_0505_5 HRGMv2_0505_5_71 97506 97985 + 3.D.1.5.1
pfam HRGMv2_0505_5 HRGMv2_0505_5_72 98005 99243 - MMR_HSR1 | FeoB_N | HydF_dimer | HydF_tetramer
pfam HRGMv2_0505_5 HRGMv2_0505_5_73 99265 100680 - Radical_SAM | BATS
CAZyme HRGMv2_0505_5 HRGMv2_0505_5_74 100714 103014 - GH3
pfam HRGMv2_0505_5 HRGMv2_0505_5_75 103315 104376 - Radical_SAM
NULL(UNKNOWN) HRGMv2_0505_5 HRGMv2_0505_5_76 104373 105617 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0505_5 HRGMv2_0505_5_77 105874 106122 - 1.B.14.6.2
Gene ID: HRGMv2_0505_5_68
Type: TC
Location: 93082 - 95100 (+)
Gene ID: HRGMv2_0505_5_69
Type: TC
Location: 95153 - 95659 (+)
Gene ID: HRGMv2_0505_5_70
Type: TC
Location: 95671 - 97437 (+)
Gene ID: HRGMv2_0505_5_71
Type: TC
Location: 97506 - 97985 (+)
Gene ID: HRGMv2_0505_5_72
Type: pfam
Location: 98005 - 99243 (-)
Gene ID: HRGMv2_0505_5_73
Type: pfam
Location: 99265 - 100680 (-)
Gene ID: HRGMv2_0505_5_74
Type: CAZyme
Location: 100714 - 103014 (-)
Gene ID: HRGMv2_0505_5_75
Type: pfam
Location: 103315 - 104376 (-)
Gene ID: HRGMv2_0505_5_76
Type:
Location: 104373 - 105617 (-)
Gene ID: HRGMv2_0505_5_77
Type: TC
Location: 105874 - 106122 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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