Cluster: HRGMv2_0505_CGC15
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_0505
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0505_5 | HRGMv2_0505_5_45 | 54173 | 56941 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0505_5 | HRGMv2_0505_5_46 | 56954 | 58633 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | HRGMv2_0505_5 | HRGMv2_0505_5_47 | 58581 | 58988 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0505_5 | HRGMv2_0505_5_48 | 58985 | 60478 | + | GH16_3 |
| CAZyme | HRGMv2_0505_5 | HRGMv2_0505_5_49 | 60482 | 63169 | - | GH78 |
| TC | HRGMv2_0505_5 | HRGMv2_0505_5_50 | 63288 | 64802 | + | 4.C.1.1.6 |
| NULL(UNKNOWN) | HRGMv2_0505_5 | HRGMv2_0505_5_51 | 64815 | 65060 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0505_5 | HRGMv2_0505_5_52 | 65080 | 66450 | + | 2.A.50.2.1 |
| NULL(UNKNOWN) | HRGMv2_0505_5 | HRGMv2_0505_5_53 | 66456 | 67463 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0505_5 | HRGMv2_0505_5_54 | 67786 | 68979 | - | PDZ | PDZ_6 |
| CAZyme | HRGMv2_0505_5 | HRGMv2_0505_5_55 | 69192 | 71390 | - | GH95 |
| TC | HRGMv2_0505_5 | HRGMv2_0505_5_56 | 71749 | 75150 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0505_5 | HRGMv2_0505_5_57 | 75166 | 77220 | + | SusD_RagB | SusD-like_3 |
| CAZyme | HRGMv2_0505_5 | HRGMv2_0505_5_58 | 77326 | 79617 | + | CBM32 |
| TF | HRGMv2_0505_5 | HRGMv2_0505_5_59 | 79692 | 80087 | - | HTH_3 |
| pfam | HRGMv2_0505_5 | HRGMv2_0505_5_60 | 80104 | 80397 | - | HigB_toxin |
| CAZyme | HRGMv2_0505_5 | HRGMv2_0505_5_61 | 81061 | 83115 | - | GH2 |
| CAZyme | HRGMv2_0505_5 | HRGMv2_0505_5_62 | 83135 | 84565 | - | GH29 |
| TC | HRGMv2_0505_5 | HRGMv2_0505_5_63 | 84582 | 86192 | - | 8.A.46.1.6 |
| TC | HRGMv2_0505_5 | HRGMv2_0505_5_64 | 86226 | 89525 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_0505_5_45
Type: TC
Location: 54173 - 56941 (+)
Type: TC
Location: 54173 - 56941 (+)
Gene ID: HRGMv2_0505_5_46
Type: pfam
Location: 56954 - 58633 (+)
Type: pfam
Location: 56954 - 58633 (+)
Gene ID: HRGMv2_0505_5_47
Type:
Location: 58581 - 58988 (+)
Type:
Location: 58581 - 58988 (+)
Gene ID: HRGMv2_0505_5_48
Type: CAZyme
Location: 58985 - 60478 (+)
Type: CAZyme
Location: 58985 - 60478 (+)
Gene ID: HRGMv2_0505_5_49
Type: CAZyme
Location: 60482 - 63169 (-)
Type: CAZyme
Location: 60482 - 63169 (-)
Gene ID: HRGMv2_0505_5_50
Type: TC
Location: 63288 - 64802 (+)
Type: TC
Location: 63288 - 64802 (+)
Gene ID: HRGMv2_0505_5_51
Type:
Location: 64815 - 65060 (+)
Type:
Location: 64815 - 65060 (+)
Gene ID: HRGMv2_0505_5_52
Type: TC
Location: 65080 - 66450 (+)
Type: TC
Location: 65080 - 66450 (+)
Gene ID: HRGMv2_0505_5_53
Type:
Location: 66456 - 67463 (+)
Type:
Location: 66456 - 67463 (+)
Gene ID: HRGMv2_0505_5_54
Type: pfam
Location: 67786 - 68979 (-)
Type: pfam
Location: 67786 - 68979 (-)
Gene ID: HRGMv2_0505_5_55
Type: CAZyme
Location: 69192 - 71390 (-)
Type: CAZyme
Location: 69192 - 71390 (-)
Gene ID: HRGMv2_0505_5_56
Type: TC
Location: 71749 - 75150 (+)
Type: TC
Location: 71749 - 75150 (+)
Gene ID: HRGMv2_0505_5_57
Type: pfam
Location: 75166 - 77220 (+)
Type: pfam
Location: 75166 - 77220 (+)
Gene ID: HRGMv2_0505_5_58
Type: CAZyme
Location: 77326 - 79617 (+)
Type: CAZyme
Location: 77326 - 79617 (+)
Gene ID: HRGMv2_0505_5_59
Type: TF
Location: 79692 - 80087 (-)
Type: TF
Location: 79692 - 80087 (-)
Gene ID: HRGMv2_0505_5_60
Type: pfam
Location: 80104 - 80397 (-)
Type: pfam
Location: 80104 - 80397 (-)
Gene ID: HRGMv2_0505_5_61
Type: CAZyme
Location: 81061 - 83115 (-)
Type: CAZyme
Location: 81061 - 83115 (-)
Gene ID: HRGMv2_0505_5_62
Type: CAZyme
Location: 83135 - 84565 (-)
Type: CAZyme
Location: 83135 - 84565 (-)
Gene ID: HRGMv2_0505_5_63
Type: TC
Location: 84582 - 86192 (-)
Type: TC
Location: 84582 - 86192 (-)
Gene ID: HRGMv2_0505_5_64
Type: TC
Location: 86226 - 89525 (-)
Type: TC
Location: 86226 - 89525 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900316015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.