dbCAN Logo

Cluster: HRGMv2_0505_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0505_3 HRGMv2_0505_3_95 112711 115716 + 1.B.14.6.1
TC HRGMv2_0505_3 HRGMv2_0505_3_96 115796 117475 + 8.A.46.1.6
CAZyme HRGMv2_0505_3 HRGMv2_0505_3_97 117478 118809 + GH43_24
CAZyme HRGMv2_0505_3 HRGMv2_0505_3_98 118846 120273 + GH43_9
CAZyme HRGMv2_0505_3 HRGMv2_0505_3_99 120350 122911 + GH115
CAZyme HRGMv2_0505_3 HRGMv2_0505_3_100 123036 124490 + GH30_2
CAZyme HRGMv2_0505_3 HRGMv2_0505_3_101 124516 126585 + GH42
CAZyme HRGMv2_0505_3 HRGMv2_0505_3_102 126598 128013 + GH28
STP HRGMv2_0505_3 HRGMv2_0505_3_103 128075 129265 - Aminotran_1_2
pfam HRGMv2_0505_3 HRGMv2_0505_3_104 129270 130445 - Aminotran_5 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP | Beta_elim_lyase | SelA
TC HRGMv2_0505_3 HRGMv2_0505_3_105 130474 133314 - 1.B.42.1.8
STP HRGMv2_0505_3 HRGMv2_0505_3_106 133386 133922 - HD
TC HRGMv2_0505_3 HRGMv2_0505_3_107 133922 135703 - 3.B.1.1.6
Gene ID: HRGMv2_0505_3_95
Type: TC
Location: 112711 - 115716 (+)
Gene ID: HRGMv2_0505_3_96
Type: TC
Location: 115796 - 117475 (+)
Gene ID: HRGMv2_0505_3_97
Type: CAZyme
Location: 117478 - 118809 (+)
Gene ID: HRGMv2_0505_3_98
Type: CAZyme
Location: 118846 - 120273 (+)
Gene ID: HRGMv2_0505_3_99
Type: CAZyme
Location: 120350 - 122911 (+)
Gene ID: HRGMv2_0505_3_100
Type: CAZyme
Location: 123036 - 124490 (+)
Gene ID: HRGMv2_0505_3_101
Type: CAZyme
Location: 124516 - 126585 (+)
Gene ID: HRGMv2_0505_3_102
Type: CAZyme
Location: 126598 - 128013 (+)
Gene ID: HRGMv2_0505_3_103
Type: STP
Location: 128075 - 129265 (-)
Gene ID: HRGMv2_0505_3_104
Type: pfam
Location: 129270 - 130445 (-)
Gene ID: HRGMv2_0505_3_105
Type: TC
Location: 130474 - 133314 (-)
Gene ID: HRGMv2_0505_3_106
Type: STP
Location: 133386 - 133922 (-)
Gene ID: HRGMv2_0505_3_107
Type: TC
Location: 133922 - 135703 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List