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Cluster: HRGMv2_0499_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0499_13 HRGMv2_0499_13_8 10952 12076 + 9.A.25.1.1
CAZyme HRGMv2_0499_13 HRGMv2_0499_13_9 12162 14348 - GH92
CAZyme HRGMv2_0499_13 HRGMv2_0499_13_10 14359 16620 - GH92
CAZyme HRGMv2_0499_13 HRGMv2_0499_13_11 16868 18367 + GH29
NULL(UNKNOWN) HRGMv2_0499_13 HRGMv2_0499_13_12 18396 20738 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0499_13 HRGMv2_0499_13_13 20847 21737 + 2.A.7.3.57
STP HRGMv2_0499_13 HRGMv2_0499_13_14 21928 22347 + Glyoxalase
TC HRGMv2_0499_13 HRGMv2_0499_13_15 22381 23934 + 3.B.1.1.2
pfam HRGMv2_0499_13 HRGMv2_0499_13_16 23968 24894 + LTD | OAD_gamma
pfam HRGMv2_0499_13 HRGMv2_0499_13_17 24934 25368 + Biotin_lipoyl
TC HRGMv2_0499_13 HRGMv2_0499_13_18 25387 26538 + 3.B.1.1.2
Gene ID: HRGMv2_0499_13_8
Type: TC
Location: 10952 - 12076 (+)
Gene ID: HRGMv2_0499_13_9
Type: CAZyme
Location: 12162 - 14348 (-)
Gene ID: HRGMv2_0499_13_10
Type: CAZyme
Location: 14359 - 16620 (-)
Gene ID: HRGMv2_0499_13_11
Type: CAZyme
Location: 16868 - 18367 (+)
Gene ID: HRGMv2_0499_13_12
Type:
Location: 18396 - 20738 (+)
Gene ID: HRGMv2_0499_13_13
Type: TC
Location: 20847 - 21737 (+)
Gene ID: HRGMv2_0499_13_14
Type: STP
Location: 21928 - 22347 (+)
Gene ID: HRGMv2_0499_13_15
Type: TC
Location: 22381 - 23934 (+)
Gene ID: HRGMv2_0499_13_16
Type: pfam
Location: 23968 - 24894 (+)
Gene ID: HRGMv2_0499_13_17
Type: pfam
Location: 24934 - 25368 (+)
Gene ID: HRGMv2_0499_13_18
Type: TC
Location: 25387 - 26538 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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