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Cluster: HRGMv2_0499_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0499_5 HRGMv2_0499_5_15 25059 26051 - GT9
pfam HRGMv2_0499_5 HRGMv2_0499_5_16 26083 26808 - CTP_transf_3 | NTP_transf_3
pfam HRGMv2_0499_5 HRGMv2_0499_5_17 26805 27755 - Lip_A_acyltrans
CAZyme HRGMv2_0499_5 HRGMv2_0499_5_18 27752 29068 - GT30
pfam HRGMv2_0499_5 HRGMv2_0499_5_19 29218 30894 - SLFN_AlbA_2 | HTH_24
NULL(UNKNOWN) HRGMv2_0499_5 HRGMv2_0499_5_20 30996 31352 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0499_5 HRGMv2_0499_5_21 31469 34360 - 2.A.6.4.2
Gene ID: HRGMv2_0499_5_15
Type: CAZyme
Location: 25059 - 26051 (-)
Gene ID: HRGMv2_0499_5_16
Type: pfam
Location: 26083 - 26808 (-)
Gene ID: HRGMv2_0499_5_17
Type: pfam
Location: 26805 - 27755 (-)
Gene ID: HRGMv2_0499_5_18
Type: CAZyme
Location: 27752 - 29068 (-)
Gene ID: HRGMv2_0499_5_19
Type: pfam
Location: 29218 - 30894 (-)
Gene ID: HRGMv2_0499_5_20
Type:
Location: 30996 - 31352 (-)
Gene ID: HRGMv2_0499_5_21
Type: TC
Location: 31469 - 34360 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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