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Cluster: HRGMv2_0499_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0499_33 HRGMv2_0499_33_21 21234 22574 - 2.A.66.1.25
pfam HRGMv2_0499_33 HRGMv2_0499_33_22 22755 24119 + Trigger_N
CAZyme HRGMv2_0499_33 HRGMv2_0499_33_23 24380 26617 + GH92
peptidase HRGMv2_0499_33 HRGMv2_0499_33_24 26698 27384 + S14.UPW
STP HRGMv2_0499_33 HRGMv2_0499_33_25 27391 28662 + AAA
TC HRGMv2_0499_33 HRGMv2_0499_33_26 28697 30877 + 2.A.16.2.2
TC HRGMv2_0499_33 HRGMv2_0499_33_27 30911 31582 + 3.A.1.140.1
Gene ID: HRGMv2_0499_33_21
Type: TC
Location: 21234 - 22574 (-)
Gene ID: HRGMv2_0499_33_22
Type: pfam
Location: 22755 - 24119 (+)
Gene ID: HRGMv2_0499_33_23
Type: CAZyme
Location: 24380 - 26617 (+)
Gene ID: HRGMv2_0499_33_24
Type: peptidase
Location: 26698 - 27384 (+)
Gene ID: HRGMv2_0499_33_25
Type: STP
Location: 27391 - 28662 (+)
Gene ID: HRGMv2_0499_33_26
Type: TC
Location: 28697 - 30877 (+)
Gene ID: HRGMv2_0499_33_27
Type: TC
Location: 30911 - 31582 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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