Cluster: HRGMv2_0499_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0499
- CGC Family ID: CGCFAM_00018
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0499_29 | HRGMv2_0499_29_14 | 14089 | 15240 | + | GT4 |
| CAZyme | HRGMv2_0499_29 | HRGMv2_0499_29_15 | 15243 | 16466 | + | GT4 |
| TC | HRGMv2_0499_29 | HRGMv2_0499_29_16 | 16481 | 17530 | + | 9.B.18.2.1 |
| pfam | HRGMv2_0499_29 | HRGMv2_0499_29_17 | 17530 | 18729 | + | Epimerase | Polysacc_synt_C |
| pfam | HRGMv2_0499_29 | HRGMv2_0499_29_18 | 18726 | 19907 | + | Epimerase_2 |
| CAZyme | HRGMv2_0499_29 | HRGMv2_0499_29_19 | 19909 | 21135 | + | GT4 |
Gene ID: HRGMv2_0499_29_14
Type: CAZyme
Location: 14089 - 15240 (+)
Type: CAZyme
Location: 14089 - 15240 (+)
Gene ID: HRGMv2_0499_29_15
Type: CAZyme
Location: 15243 - 16466 (+)
Type: CAZyme
Location: 15243 - 16466 (+)
Gene ID: HRGMv2_0499_29_16
Type: TC
Location: 16481 - 17530 (+)
Type: TC
Location: 16481 - 17530 (+)
Gene ID: HRGMv2_0499_29_17
Type: pfam
Location: 17530 - 18729 (+)
Type: pfam
Location: 17530 - 18729 (+)
Gene ID: HRGMv2_0499_29_18
Type: pfam
Location: 18726 - 19907 (+)
Type: pfam
Location: 18726 - 19907 (+)
Gene ID: HRGMv2_0499_29_19
Type: CAZyme
Location: 19909 - 21135 (+)
Type: CAZyme
Location: 19909 - 21135 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Paramuribaculum
Species
Paramuribaculum sp900759915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0499_29_16 | vegan > omnivore | 1.14674 | 0.00364 |
| HRGMv2_0499_29_18 | vegan > omnivore | 1.51395 | 0.00364 |