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Cluster: HRGMv2_0499_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0499_27 HRGMv2_0499_27_21 19109 19771 - GH73
NULL(UNKNOWN) HRGMv2_0499_27 HRGMv2_0499_27_22 20303 21160 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0499_27 HRGMv2_0499_27_23 21189 23216 + 3.D.10.1.5
TC HRGMv2_0499_27 HRGMv2_0499_27_24 23256 24011 + 3.D.10.1.5
peptidase HRGMv2_0499_27 HRGMv2_0499_27_25 24094 26310 - M06.UPW
NULL(UNKNOWN) HRGMv2_0499_27 HRGMv2_0499_27_26 26611 27339 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0499_27 HRGMv2_0499_27_27 27468 29783 - GH92
Gene ID: HRGMv2_0499_27_21
Type: CAZyme
Location: 19109 - 19771 (-)
Gene ID: HRGMv2_0499_27_22
Type:
Location: 20303 - 21160 (+)
Gene ID: HRGMv2_0499_27_23
Type: TC
Location: 21189 - 23216 (+)
Gene ID: HRGMv2_0499_27_24
Type: TC
Location: 23256 - 24011 (+)
Gene ID: HRGMv2_0499_27_25
Type: peptidase
Location: 24094 - 26310 (-)
Gene ID: HRGMv2_0499_27_26
Type:
Location: 26611 - 27339 (+)
Gene ID: HRGMv2_0499_27_27
Type: CAZyme
Location: 27468 - 29783 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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