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Cluster: HRGMv2_0499_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0499_1 HRGMv2_0499_1_40 50392 54651 + 2.A.103.1.3
NULL(UNKNOWN) HRGMv2_0499_1 HRGMv2_0499_1_41 54664 55548 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0499_1 HRGMv2_0499_1_42 55567 57285 + 9.B.106.2.2
TC HRGMv2_0499_1 HRGMv2_0499_1_43 57313 58974 - 4.C.1.1.4
pfam HRGMv2_0499_1 HRGMv2_0499_1_44 59099 60418 + UPF0004 | Radical_SAM
CAZyme HRGMv2_0499_1 HRGMv2_0499_1_45 60415 61443 + GT2
STP HRGMv2_0499_1 HRGMv2_0499_1_46 61444 63096 - Pkinase
CAZyme HRGMv2_0499_1 HRGMv2_0499_1_47 63242 64078 - GH16_3
CAZyme HRGMv2_0499_1 HRGMv2_0499_1_48 64083 65960 - CBM62
Gene ID: HRGMv2_0499_1_40
Type: TC
Location: 50392 - 54651 (+)
Gene ID: HRGMv2_0499_1_41
Type:
Location: 54664 - 55548 (+)
Gene ID: HRGMv2_0499_1_42
Type: TC
Location: 55567 - 57285 (+)
Gene ID: HRGMv2_0499_1_43
Type: TC
Location: 57313 - 58974 (-)
Gene ID: HRGMv2_0499_1_44
Type: pfam
Location: 59099 - 60418 (+)
Gene ID: HRGMv2_0499_1_45
Type: CAZyme
Location: 60415 - 61443 (+)
Gene ID: HRGMv2_0499_1_46
Type: STP
Location: 61444 - 63096 (-)
Gene ID: HRGMv2_0499_1_47
Type: CAZyme
Location: 63242 - 64078 (-)
Gene ID: HRGMv2_0499_1_48
Type: CAZyme
Location: 64083 - 65960 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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