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Cluster: HRGMv2_0471_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0471_15 HRGMv2_0471_15_74 88221 88970 + 3.A.1.27.2
TC HRGMv2_0471_15 HRGMv2_0471_15_75 88967 89749 + 3.A.1.27.5
pfam HRGMv2_0471_15 HRGMv2_0471_15_76 89820 90656 + Glycos_transf_2
pfam HRGMv2_0471_15 HRGMv2_0471_15_77 90786 92483 + DUF6377
TC HRGMv2_0471_15 HRGMv2_0471_15_78 92807 95797 + 1.B.14.6.1
pfam HRGMv2_0471_15 HRGMv2_0471_15_79 95817 97547 + SusD_RagB | SusD-like_3
pfam HRGMv2_0471_15 HRGMv2_0471_15_80 97571 99418 + SusF_SusE | SusF_SusE | SusF_SusE | SusF_SusE | SusF_SusE
CAZyme HRGMv2_0471_15 HRGMv2_0471_15_81 99435 100850 + GH27
NULL(UNKNOWN) HRGMv2_0471_15 HRGMv2_0471_15_82 101323 101442 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0471_15 HRGMv2_0471_15_83 101499 102332 + 0036286
CAZyme HRGMv2_0471_15 HRGMv2_0471_15_84 102329 103390 + CE19
pfam HRGMv2_0471_15 HRGMv2_0471_15_85 103577 104425 + DUF3737
CAZyme HRGMv2_0471_15 HRGMv2_0471_15_86 104747 108064 - CBM26 | GH13_42
NULL(UNKNOWN) HRGMv2_0471_15 HRGMv2_0471_15_87 108523 109095 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0471_15 HRGMv2_0471_15_88 109167 111182 + 1.B.14.6.12
Gene ID: HRGMv2_0471_15_74
Type: TC
Location: 88221 - 88970 (+)
Gene ID: HRGMv2_0471_15_75
Type: TC
Location: 88967 - 89749 (+)
Gene ID: HRGMv2_0471_15_76
Type: pfam
Location: 89820 - 90656 (+)
Gene ID: HRGMv2_0471_15_77
Type: pfam
Location: 90786 - 92483 (+)
Gene ID: HRGMv2_0471_15_78
Type: TC
Location: 92807 - 95797 (+)
Gene ID: HRGMv2_0471_15_79
Type: pfam
Location: 95817 - 97547 (+)
Gene ID: HRGMv2_0471_15_80
Type: pfam
Location: 97571 - 99418 (+)
Gene ID: HRGMv2_0471_15_81
Type: CAZyme
Location: 99435 - 100850 (+)
Gene ID: HRGMv2_0471_15_82
Type:
Location: 101323 - 101442 (-)
Gene ID: HRGMv2_0471_15_83
Type: TF
Location: 101499 - 102332 (+)
Gene ID: HRGMv2_0471_15_84
Type: CAZyme
Location: 102329 - 103390 (+)
Gene ID: HRGMv2_0471_15_85
Type: pfam
Location: 103577 - 104425 (+)
Gene ID: HRGMv2_0471_15_86
Type: CAZyme
Location: 104747 - 108064 (-)
Gene ID: HRGMv2_0471_15_87
Type:
Location: 108523 - 109095 (+)
Gene ID: HRGMv2_0471_15_88
Type: TC
Location: 109167 - 111182 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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