dbCAN Logo

Cluster: HRGMv2_0471_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0471_57 HRGMv2_0471_57_8 6228 9371 + 2.A.6.1.16
pfam HRGMv2_0471_57 HRGMv2_0471_57_9 9506 10720 + OEP | OEP
TC HRGMv2_0471_57 HRGMv2_0471_57_10 10797 11594 + 1.B.18.3.3
TC HRGMv2_0471_57 HRGMv2_0471_57_11 11670 14132 + 8.A.3.1.2
TC HRGMv2_0471_57 HRGMv2_0471_57_12 14172 15797 + 2.A.66.1.40
pfam HRGMv2_0471_57 HRGMv2_0471_57_13 15794 16957 + EpsG
CAZyme HRGMv2_0471_57 HRGMv2_0471_57_14 16968 17996 + GT2
CAZyme HRGMv2_0471_57 HRGMv2_0471_57_15 18028 18927 + GT8
Gene ID: HRGMv2_0471_57_8
Type: TC
Location: 6228 - 9371 (+)
Gene ID: HRGMv2_0471_57_9
Type: pfam
Location: 9506 - 10720 (+)
Gene ID: HRGMv2_0471_57_10
Type: TC
Location: 10797 - 11594 (+)
Gene ID: HRGMv2_0471_57_11
Type: TC
Location: 11670 - 14132 (+)
Gene ID: HRGMv2_0471_57_12
Type: TC
Location: 14172 - 15797 (+)
Gene ID: HRGMv2_0471_57_13
Type: pfam
Location: 15794 - 16957 (+)
Gene ID: HRGMv2_0471_57_14
Type: CAZyme
Location: 16968 - 17996 (+)
Gene ID: HRGMv2_0471_57_15
Type: CAZyme
Location: 18028 - 18927 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List