Cluster: HRGMv2_0471_CGC28
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 12
- Substrate:
- Genome ID: HRGMv2_0471
- CGC Family ID: CGCFAM_01254
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0471_55 | HRGMv2_0471_55_35 | 46538 | 49102 | - | GH3 |
| CAZyme | HRGMv2_0471_55 | HRGMv2_0471_55_36 | 49119 | 50549 | - | GH30_2 |
| CAZyme | HRGMv2_0471_55 | HRGMv2_0471_55_37 | 50584 | 51978 | - | GH30_2 |
| CAZyme | HRGMv2_0471_55 | HRGMv2_0471_55_38 | 52045 | 54261 | - | GH92 |
| pfam | HRGMv2_0471_55 | HRGMv2_0471_55_39 | 54548 | 55498 | - | BT_3987-like_N | BT_3044-like_C |
| pfam | HRGMv2_0471_55 | HRGMv2_0471_55_40 | 55540 | 57546 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0471_55 | HRGMv2_0471_55_41 | 57559 | 60654 | - | 1.B.14.6.1 |
| pfam | HRGMv2_0471_55 | HRGMv2_0471_55_42 | 60679 | 62007 | - | NHL | TIG |
| CAZyme | HRGMv2_0471_55 | HRGMv2_0471_55_43 | 62097 | 64199 | - | GH36 |
| CAZyme | HRGMv2_0471_55 | HRGMv2_0471_55_44 | 64590 | 66809 | - | GH92 |
| CAZyme | HRGMv2_0471_55 | HRGMv2_0471_55_45 | 66815 | 68815 | - | GH2 |
| STP | HRGMv2_0471_55 | HRGMv2_0471_55_46 | 69017 | 72376 | + | HATPase_c | HisKA | Reg_prop | Y_Y_Y |
| TF | HRGMv2_0471_55 | HRGMv2_0471_55_47 | 72342 | 73049 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_0471_55 | HRGMv2_0471_55_48 | 73046 | 74074 | + | GH43_24 |
| pfam | HRGMv2_0471_55 | HRGMv2_0471_55_49 | 74108 | 76078 | + | FG-GAP | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 |
| CAZyme | HRGMv2_0471_55 | HRGMv2_0471_55_50 | 76210 | 79119 | + | GH2 |
| pfam | HRGMv2_0471_55 | HRGMv2_0471_55_51 | 79369 | 81228 | + | CBM_6 |
| CAZyme | HRGMv2_0471_55 | HRGMv2_0471_55_52 | 82184 | 83623 | + | CBM6 | GH43_2 |
| CAZyme | HRGMv2_0471_55 | HRGMv2_0471_55_53 | 83793 | 88040 | + | GH2 |
| CAZyme | HRGMv2_0471_55 | HRGMv2_0471_55_54 | 88603 | 91752 | - | CBM26 | GH13_42 |
Gene ID: HRGMv2_0471_55_35
Type: CAZyme
Location: 46538 - 49102 (-)
Type: CAZyme
Location: 46538 - 49102 (-)
Gene ID: HRGMv2_0471_55_36
Type: CAZyme
Location: 49119 - 50549 (-)
Type: CAZyme
Location: 49119 - 50549 (-)
Gene ID: HRGMv2_0471_55_37
Type: CAZyme
Location: 50584 - 51978 (-)
Type: CAZyme
Location: 50584 - 51978 (-)
Gene ID: HRGMv2_0471_55_38
Type: CAZyme
Location: 52045 - 54261 (-)
Type: CAZyme
Location: 52045 - 54261 (-)
Gene ID: HRGMv2_0471_55_39
Type: pfam
Location: 54548 - 55498 (-)
Type: pfam
Location: 54548 - 55498 (-)
Gene ID: HRGMv2_0471_55_40
Type: pfam
Location: 55540 - 57546 (-)
Type: pfam
Location: 55540 - 57546 (-)
Gene ID: HRGMv2_0471_55_41
Type: TC
Location: 57559 - 60654 (-)
Type: TC
Location: 57559 - 60654 (-)
Gene ID: HRGMv2_0471_55_42
Type: pfam
Location: 60679 - 62007 (-)
Type: pfam
Location: 60679 - 62007 (-)
Gene ID: HRGMv2_0471_55_43
Type: CAZyme
Location: 62097 - 64199 (-)
Type: CAZyme
Location: 62097 - 64199 (-)
Gene ID: HRGMv2_0471_55_44
Type: CAZyme
Location: 64590 - 66809 (-)
Type: CAZyme
Location: 64590 - 66809 (-)
Gene ID: HRGMv2_0471_55_45
Type: CAZyme
Location: 66815 - 68815 (-)
Type: CAZyme
Location: 66815 - 68815 (-)
Gene ID: HRGMv2_0471_55_46
Type: STP
Location: 69017 - 72376 (+)
Type: STP
Location: 69017 - 72376 (+)
Gene ID: HRGMv2_0471_55_47
Type: TF
Location: 72342 - 73049 (+)
Type: TF
Location: 72342 - 73049 (+)
Gene ID: HRGMv2_0471_55_48
Type: CAZyme
Location: 73046 - 74074 (+)
Type: CAZyme
Location: 73046 - 74074 (+)
Gene ID: HRGMv2_0471_55_49
Type: pfam
Location: 74108 - 76078 (+)
Type: pfam
Location: 74108 - 76078 (+)
Gene ID: HRGMv2_0471_55_50
Type: CAZyme
Location: 76210 - 79119 (+)
Type: CAZyme
Location: 76210 - 79119 (+)
Gene ID: HRGMv2_0471_55_51
Type: pfam
Location: 79369 - 81228 (+)
Type: pfam
Location: 79369 - 81228 (+)
Gene ID: HRGMv2_0471_55_52
Type: CAZyme
Location: 82184 - 83623 (+)
Type: CAZyme
Location: 82184 - 83623 (+)
Gene ID: HRGMv2_0471_55_53
Type: CAZyme
Location: 83793 - 88040 (+)
Type: CAZyme
Location: 83793 - 88040 (+)
Gene ID: HRGMv2_0471_55_54
Type: CAZyme
Location: 88603 - 91752 (-)
Type: CAZyme
Location: 88603 - 91752 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
JAGBWK01
Species
JAGBWK01 sp001915385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.