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Cluster: HRGMv2_0471_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0471_55 HRGMv2_0471_55_21 28998 30365 + 2.A.66.1.32
pfam HRGMv2_0471_55 HRGMv2_0471_55_22 30967 32508 + Phage_integrase | Phage_int_SAM_5 | Arm-DNA-bind_5
pfam HRGMv2_0471_55 HRGMv2_0471_55_23 32635 33081 - LMWPc
TC HRGMv2_0471_55 HRGMv2_0471_55_24 33112 34305 - 2.A.1.36.3
TC HRGMv2_0471_55 HRGMv2_0471_55_25 34319 34645 - 2.A.7.1.4
STP HRGMv2_0471_55 HRGMv2_0471_55_26 34804 35367 + cNMP_binding
NULL(UNKNOWN) HRGMv2_0471_55 HRGMv2_0471_55_27 36074 36205 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0471_55 HRGMv2_0471_55_28 36673 39198 + GH2
Gene ID: HRGMv2_0471_55_21
Type: TC
Location: 28998 - 30365 (+)
Gene ID: HRGMv2_0471_55_22
Type: pfam
Location: 30967 - 32508 (+)
Gene ID: HRGMv2_0471_55_23
Type: pfam
Location: 32635 - 33081 (-)
Gene ID: HRGMv2_0471_55_24
Type: TC
Location: 33112 - 34305 (-)
Gene ID: HRGMv2_0471_55_25
Type: TC
Location: 34319 - 34645 (-)
Gene ID: HRGMv2_0471_55_26
Type: STP
Location: 34804 - 35367 (+)
Gene ID: HRGMv2_0471_55_27
Type:
Location: 36074 - 36205 (-)
Gene ID: HRGMv2_0471_55_28
Type: CAZyme
Location: 36673 - 39198 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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