Cluster: HRGMv2_0471_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: pectin/alpha-glucan
- Genome ID: HRGMv2_0471
- CGC Family ID: CGCFAM_00025
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0471_52 | HRGMv2_0471_52_61 | 68394 | 71438 | + | 1.B.14.6.1 |
| TC | HRGMv2_0471_52 | HRGMv2_0471_52_62 | 71473 | 73059 | + | 8.A.46.1.1 |
| pfam | HRGMv2_0471_52 | HRGMv2_0471_52_63 | 73115 | 74356 | + | SusE |
| pfam | HRGMv2_0471_52 | HRGMv2_0471_52_64 | 74508 | 75986 | + | SusF_SusE |
| CAZyme | HRGMv2_0471_52 | HRGMv2_0471_52_65 | 76507 | 78141 | + | GH43_35 |
Gene ID: HRGMv2_0471_52_61
Type: TC
Location: 68394 - 71438 (+)
Type: TC
Location: 68394 - 71438 (+)
Gene ID: HRGMv2_0471_52_62
Type: TC
Location: 71473 - 73059 (+)
Type: TC
Location: 71473 - 73059 (+)
Gene ID: HRGMv2_0471_52_63
Type: pfam
Location: 73115 - 74356 (+)
Type: pfam
Location: 73115 - 74356 (+)
Gene ID: HRGMv2_0471_52_64
Type: pfam
Location: 74508 - 75986 (+)
Type: pfam
Location: 74508 - 75986 (+)
Gene ID: HRGMv2_0471_52_65
Type: CAZyme
Location: 76507 - 78141 (+)
Type: CAZyme
Location: 76507 - 78141 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
JAGBWK01
Species
JAGBWK01 sp001915385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.