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Cluster: HRGMv2_0471_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0471_50 HRGMv2_0471_50_79 93100 94332 + 9.B.156.3.1
CAZyme HRGMv2_0471_50 HRGMv2_0471_50_80 94608 96614 + GH36
CAZyme HRGMv2_0471_50 HRGMv2_0471_50_81 96648 99110 + GH36
TF HRGMv2_0471_50 HRGMv2_0471_50_82 99318 103382 + HTH_AraC
CAZyme HRGMv2_0471_50 HRGMv2_0471_50_83 103447 105696 + GH3
CAZyme HRGMv2_0471_50 HRGMv2_0471_50_84 105755 107671 + CE20 | CE20
CAZyme HRGMv2_0471_50 HRGMv2_0471_50_85 107714 109849 + GH36
CAZyme HRGMv2_0471_50 HRGMv2_0471_50_86 110146 112311 + GH36
CAZyme HRGMv2_0471_50 HRGMv2_0471_50_87 112443 114623 + GH92
Gene ID: HRGMv2_0471_50_79
Type: TC
Location: 93100 - 94332 (+)
Gene ID: HRGMv2_0471_50_80
Type: CAZyme
Location: 94608 - 96614 (+)
Gene ID: HRGMv2_0471_50_81
Type: CAZyme
Location: 96648 - 99110 (+)
Gene ID: HRGMv2_0471_50_82
Type: TF
Location: 99318 - 103382 (+)
Gene ID: HRGMv2_0471_50_83
Type: CAZyme
Location: 103447 - 105696 (+)
Gene ID: HRGMv2_0471_50_84
Type: CAZyme
Location: 105755 - 107671 (+)
Gene ID: HRGMv2_0471_50_85
Type: CAZyme
Location: 107714 - 109849 (+)
Gene ID: HRGMv2_0471_50_86
Type: CAZyme
Location: 110146 - 112311 (+)
Gene ID: HRGMv2_0471_50_87
Type: CAZyme
Location: 112443 - 114623 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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