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Cluster: HRGMv2_0471_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0471_35 HRGMv2_0471_35_40 40601 42853 - GH92
CAZyme HRGMv2_0471_35 HRGMv2_0471_35_41 43455 46013 + GH3
sulfatase HRGMv2_0471_35 HRGMv2_0471_35_42 46229 46912 + S1_16
TC HRGMv2_0471_35 HRGMv2_0471_35_43 47151 47726 - 3.D.6.1.4
TC HRGMv2_0471_35 HRGMv2_0471_35_44 47784 48374 - 3.D.6.1.2
pfam HRGMv2_0471_35 HRGMv2_0471_35_45 48384 48974 - FMN_bind
TC HRGMv2_0471_35 HRGMv2_0471_35_46 48971 49912 - 3.D.6.1.1
TC HRGMv2_0471_35 HRGMv2_0471_35_47 50015 51364 - 3.D.6.1.1
TC HRGMv2_0471_35 HRGMv2_0471_35_48 51398 52255 - 3.D.6.1.2
Gene ID: HRGMv2_0471_35_40
Type: CAZyme
Location: 40601 - 42853 (-)
Gene ID: HRGMv2_0471_35_41
Type: CAZyme
Location: 43455 - 46013 (+)
Gene ID: HRGMv2_0471_35_42
Type: sulfatase
Location: 46229 - 46912 (+)
Gene ID: HRGMv2_0471_35_43
Type: TC
Location: 47151 - 47726 (-)
Gene ID: HRGMv2_0471_35_44
Type: TC
Location: 47784 - 48374 (-)
Gene ID: HRGMv2_0471_35_45
Type: pfam
Location: 48384 - 48974 (-)
Gene ID: HRGMv2_0471_35_46
Type: TC
Location: 48971 - 49912 (-)
Gene ID: HRGMv2_0471_35_47
Type: TC
Location: 50015 - 51364 (-)
Gene ID: HRGMv2_0471_35_48
Type: TC
Location: 51398 - 52255 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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