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Cluster: HRGMv2_0471_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0471_3 HRGMv2_0471_3_13 19698 20453 - 3.D.10.1.5
TC HRGMv2_0471_3 HRGMv2_0471_3_14 20487 22487 - 3.D.10.1.5
NULL(UNKNOWN) HRGMv2_0471_3 HRGMv2_0471_3_15 22525 23592 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0471_3 HRGMv2_0471_3_16 24185 24970 - Hexapep | Acetyltransf_11
TC HRGMv2_0471_3 HRGMv2_0471_3_17 25315 27417 - 2.A.9.3.1
peptidase HRGMv2_0471_3 HRGMv2_0471_3_18 27440 29056 - C26.964
pfam HRGMv2_0471_3 HRGMv2_0471_3_19 29279 30430 - AAA_14 | DUF4143
CAZyme HRGMv2_0471_3 HRGMv2_0471_3_20 30566 31303 - GT2
Gene ID: HRGMv2_0471_3_13
Type: TC
Location: 19698 - 20453 (-)
Gene ID: HRGMv2_0471_3_14
Type: TC
Location: 20487 - 22487 (-)
Gene ID: HRGMv2_0471_3_15
Type:
Location: 22525 - 23592 (-)
Gene ID: HRGMv2_0471_3_16
Type: pfam
Location: 24185 - 24970 (-)
Gene ID: HRGMv2_0471_3_17
Type: TC
Location: 25315 - 27417 (-)
Gene ID: HRGMv2_0471_3_18
Type: peptidase
Location: 27440 - 29056 (-)
Gene ID: HRGMv2_0471_3_19
Type: pfam
Location: 29279 - 30430 (-)
Gene ID: HRGMv2_0471_3_20
Type: CAZyme
Location: 30566 - 31303 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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