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Cluster: HRGMv2_0438_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0438_3 HRGMv2_0438_3_64 84919 88095 + 1.B.14.6.1
pfam HRGMv2_0438_3 HRGMv2_0438_3_65 88117 89667 + SusD_RagB | SusD-like_3
TC HRGMv2_0438_3 HRGMv2_0438_3_66 89878 90156 + 2.A.124.1.2
TC HRGMv2_0438_3 HRGMv2_0438_3_67 90153 90755 + 2.A.124.1.2
CAZyme HRGMv2_0438_3 HRGMv2_0438_3_68 90853 93996 + GH2
CAZyme HRGMv2_0438_3 HRGMv2_0438_3_69 94451 96379 + GH63
TC HRGMv2_0438_3 HRGMv2_0438_3_70 96600 98804 - 3.A.10.1.10
Gene ID: HRGMv2_0438_3_64
Type: TC
Location: 84919 - 88095 (+)
Gene ID: HRGMv2_0438_3_65
Type: pfam
Location: 88117 - 89667 (+)
Gene ID: HRGMv2_0438_3_66
Type: TC
Location: 89878 - 90156 (+)
Gene ID: HRGMv2_0438_3_67
Type: TC
Location: 90153 - 90755 (+)
Gene ID: HRGMv2_0438_3_68
Type: CAZyme
Location: 90853 - 93996 (+)
Gene ID: HRGMv2_0438_3_69
Type: CAZyme
Location: 94451 - 96379 (+)
Gene ID: HRGMv2_0438_3_70
Type: TC
Location: 96600 - 98804 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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