Cluster: HRGMv2_0438_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0438
- CGC Family ID: CGCFAM_00013
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0438_3 | HRGMv2_0438_3_46 | 63966 | 65234 | + | 9.B.146.1.6 |
| NULL(UNKNOWN) | HRGMv2_0438_3 | HRGMv2_0438_3_47 | 65252 | 65347 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0438_3 | HRGMv2_0438_3_48 | 65340 | 66674 | + | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | HRGMv2_0438_3 | HRGMv2_0438_3_49 | 66728 | 68053 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_0438_3 | HRGMv2_0438_3_50 | 68112 | 69320 | + | GT28 |
Gene ID: HRGMv2_0438_3_46
Type: TC
Location: 63966 - 65234 (+)
Type: TC
Location: 63966 - 65234 (+)
Gene ID: HRGMv2_0438_3_47
Type:
Location: 65252 - 65347 (+)
Type:
Location: 65252 - 65347 (+)
Gene ID: HRGMv2_0438_3_48
Type: pfam
Location: 65340 - 66674 (+)
Type: pfam
Location: 65340 - 66674 (+)
Gene ID: HRGMv2_0438_3_49
Type: TC
Location: 66728 - 68053 (+)
Type: TC
Location: 66728 - 68053 (+)
Gene ID: HRGMv2_0438_3_50
Type: CAZyme
Location: 68112 - 69320 (+)
Type: CAZyme
Location: 68112 - 69320 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp905197435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.