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Cluster: HRGMv2_0438_CGC56

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0438_48 HRGMv2_0438_48_10 9895 10860 + GT2
pfam HRGMv2_0438_48 HRGMv2_0438_48_11 10888 11781 + Glycos_transf_2 | Glyco_tranf_2_5
CAZyme HRGMv2_0438_48 HRGMv2_0438_48_12 11816 12652 + GT2
CAZyme HRGMv2_0438_48 HRGMv2_0438_48_13 12649 13467 + GT2
CAZyme HRGMv2_0438_48 HRGMv2_0438_48_14 13472 14575 - GT4
pfam HRGMv2_0438_48 HRGMv2_0438_48_15 14685 15482 + DUF5672
TC HRGMv2_0438_48 HRGMv2_0438_48_16 16088 17926 + 3.A.1.135.5
Gene ID: HRGMv2_0438_48_10
Type: CAZyme
Location: 9895 - 10860 (+)
Gene ID: HRGMv2_0438_48_11
Type: pfam
Location: 10888 - 11781 (+)
Gene ID: HRGMv2_0438_48_12
Type: CAZyme
Location: 11816 - 12652 (+)
Gene ID: HRGMv2_0438_48_13
Type: CAZyme
Location: 12649 - 13467 (+)
Gene ID: HRGMv2_0438_48_14
Type: CAZyme
Location: 13472 - 14575 (-)
Gene ID: HRGMv2_0438_48_15
Type: pfam
Location: 14685 - 15482 (+)
Gene ID: HRGMv2_0438_48_16
Type: TC
Location: 16088 - 17926 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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