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Cluster: HRGMv2_0438_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0438_29 HRGMv2_0438_29_4 1956 3710 + 3.A.2.3.3
TC HRGMv2_0438_29 HRGMv2_0438_29_5 3722 5050 + 3.A.2.3.3
pfam HRGMv2_0438_29 HRGMv2_0438_29_6 5077 5682 + ATP-synt_D
TC HRGMv2_0438_29 HRGMv2_0438_29_7 5679 7514 + 3.A.2.3.3
pfam HRGMv2_0438_29 HRGMv2_0438_29_8 7539 7958 + ATP-synt_C | ATP-synt_C
CAZyme HRGMv2_0438_29 HRGMv2_0438_29_9 8254 9915 + GT3
CAZyme HRGMv2_0438_29 HRGMv2_0438_29_10 9947 12511 + GT35
Gene ID: HRGMv2_0438_29_4
Type: TC
Location: 1956 - 3710 (+)
Gene ID: HRGMv2_0438_29_5
Type: TC
Location: 3722 - 5050 (+)
Gene ID: HRGMv2_0438_29_6
Type: pfam
Location: 5077 - 5682 (+)
Gene ID: HRGMv2_0438_29_7
Type: TC
Location: 5679 - 7514 (+)
Gene ID: HRGMv2_0438_29_8
Type: pfam
Location: 7539 - 7958 (+)
Gene ID: HRGMv2_0438_29_9
Type: CAZyme
Location: 8254 - 9915 (+)
Gene ID: HRGMv2_0438_29_10
Type: CAZyme
Location: 9947 - 12511 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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