Cluster: HRGMv2_0438_CGC45
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0438
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0438_27 | HRGMv2_0438_27_19 | 16576 | 17214 | - | 9.B.104.3.2 |
| NULL(UNKNOWN) | HRGMv2_0438_27 | HRGMv2_0438_27_20 | 17253 | 17369 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0438_27 | HRGMv2_0438_27_21 | 17406 | 19343 | + | GH133 |
| CAZyme | HRGMv2_0438_27 | HRGMv2_0438_27_22 | 19361 | 20629 | + | GT4 |
| CAZyme | HRGMv2_0438_27 | HRGMv2_0438_27_23 | 20646 | 22061 | + | GH57 |
| pfam | HRGMv2_0438_27 | HRGMv2_0438_27_24 | 22137 | 23729 | - | DUF4270 |
| CAZyme | HRGMv2_0438_27 | HRGMv2_0438_27_25 | 23753 | 24577 | - | GT5 |
Gene ID: HRGMv2_0438_27_19
Type: TC
Location: 16576 - 17214 (-)
Type: TC
Location: 16576 - 17214 (-)
Gene ID: HRGMv2_0438_27_20
Type:
Location: 17253 - 17369 (-)
Type:
Location: 17253 - 17369 (-)
Gene ID: HRGMv2_0438_27_21
Type: CAZyme
Location: 17406 - 19343 (+)
Type: CAZyme
Location: 17406 - 19343 (+)
Gene ID: HRGMv2_0438_27_22
Type: CAZyme
Location: 19361 - 20629 (+)
Type: CAZyme
Location: 19361 - 20629 (+)
Gene ID: HRGMv2_0438_27_23
Type: CAZyme
Location: 20646 - 22061 (+)
Type: CAZyme
Location: 20646 - 22061 (+)
Gene ID: HRGMv2_0438_27_24
Type: pfam
Location: 22137 - 23729 (-)
Type: pfam
Location: 22137 - 23729 (-)
Gene ID: HRGMv2_0438_27_25
Type: CAZyme
Location: 23753 - 24577 (-)
Type: CAZyme
Location: 23753 - 24577 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp905197435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.