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Cluster: HRGMv2_0438_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0438_24 HRGMv2_0438_24_26 35380 36120 + 3.A.1.128.6
peptidase HRGMv2_0438_24 HRGMv2_0438_24_27 36133 37017 + G04.UNW
NULL(UNKNOWN) HRGMv2_0438_24 HRGMv2_0438_24_28 37049 37198 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0438_24 HRGMv2_0438_24_29 37457 38983 + 2.A.21.9.2
CAZyme HRGMv2_0438_24 HRGMv2_0438_24_30 39062 41308 - GH92
CAZyme HRGMv2_0438_24 HRGMv2_0438_24_31 41630 42601 - GH130_2
pfam HRGMv2_0438_24 HRGMv2_0438_24_32 42625 43935 - MFS_1 | MFS_1
CAZyme HRGMv2_0438_24 HRGMv2_0438_24_33 43957 46227 - GH92
CAZyme HRGMv2_0438_24 HRGMv2_0438_24_34 46251 48260 - GH97
TC HRGMv2_0438_24 HRGMv2_0438_24_35 48354 50075 - 8.A.46.2.1
TC HRGMv2_0438_24 HRGMv2_0438_24_36 50103 53459 - 1.B.14.6.2
Gene ID: HRGMv2_0438_24_26
Type: TC
Location: 35380 - 36120 (+)
Gene ID: HRGMv2_0438_24_27
Type: peptidase
Location: 36133 - 37017 (+)
Gene ID: HRGMv2_0438_24_28
Type:
Location: 37049 - 37198 (+)
Gene ID: HRGMv2_0438_24_29
Type: TC
Location: 37457 - 38983 (+)
Gene ID: HRGMv2_0438_24_30
Type: CAZyme
Location: 39062 - 41308 (-)
Gene ID: HRGMv2_0438_24_31
Type: CAZyme
Location: 41630 - 42601 (-)
Gene ID: HRGMv2_0438_24_32
Type: pfam
Location: 42625 - 43935 (-)
Gene ID: HRGMv2_0438_24_33
Type: CAZyme
Location: 43957 - 46227 (-)
Gene ID: HRGMv2_0438_24_34
Type: CAZyme
Location: 46251 - 48260 (-)
Gene ID: HRGMv2_0438_24_35
Type: TC
Location: 48354 - 50075 (-)
Gene ID: HRGMv2_0438_24_36
Type: TC
Location: 50103 - 53459 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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