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Cluster: HRGMv2_0438_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0438_20 HRGMv2_0438_20_5 6761 9793 - 1.B.14.6.1
CAZyme HRGMv2_0438_20 HRGMv2_0438_20_6 9862 12297 - GH127
pfam HRGMv2_0438_20 HRGMv2_0438_20_7 12699 14405 + PDDEXK_9 | AAA-ATPase_like
CAZyme HRGMv2_0438_20 HRGMv2_0438_20_8 14479 17301 + GH97
CAZyme HRGMv2_0438_20 HRGMv2_0438_20_9 17298 19700 + CBM32 | GH43_34
CAZyme HRGMv2_0438_20 HRGMv2_0438_20_10 19713 22127 + GH127
STP HRGMv2_0438_20 HRGMv2_0438_20_11 22530 23759 + HD
pfam HRGMv2_0438_20 HRGMv2_0438_20_12 23844 24884 + Hexapep | Hexapep | LpxD
CAZyme HRGMv2_0438_20 HRGMv2_0438_20_13 24888 26273 + CE11
Gene ID: HRGMv2_0438_20_5
Type: TC
Location: 6761 - 9793 (-)
Gene ID: HRGMv2_0438_20_6
Type: CAZyme
Location: 9862 - 12297 (-)
Gene ID: HRGMv2_0438_20_7
Type: pfam
Location: 12699 - 14405 (+)
Gene ID: HRGMv2_0438_20_8
Type: CAZyme
Location: 14479 - 17301 (+)
Gene ID: HRGMv2_0438_20_9
Type: CAZyme
Location: 17298 - 19700 (+)
Gene ID: HRGMv2_0438_20_10
Type: CAZyme
Location: 19713 - 22127 (+)
Gene ID: HRGMv2_0438_20_11
Type: STP
Location: 22530 - 23759 (+)
Gene ID: HRGMv2_0438_20_12
Type: pfam
Location: 23844 - 24884 (+)
Gene ID: HRGMv2_0438_20_13
Type: CAZyme
Location: 24888 - 26273 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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