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Cluster: HRGMv2_0438_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0438_14 HRGMv2_0438_14_19 22975 24426 + 2.A.36.6.11
TC HRGMv2_0438_14 HRGMv2_0438_14_20 24592 26259 + 4.C.1.1.4
CAZyme HRGMv2_0438_14 HRGMv2_0438_14_21 26482 28635 - GH97
CAZyme HRGMv2_0438_14 HRGMv2_0438_14_22 28657 31155 - GH31
CAZyme HRGMv2_0438_14 HRGMv2_0438_14_23 31190 32995 - GH66
pfam HRGMv2_0438_14 HRGMv2_0438_14_24 33009 34505 - SusE | SusF_SusE | SusF_SusE
TC HRGMv2_0438_14 HRGMv2_0438_14_25 34525 36030 - 8.A.46.1.5
TC HRGMv2_0438_14 HRGMv2_0438_14_26 36030 39032 - 1.B.14.6.1
Gene ID: HRGMv2_0438_14_19
Type: TC
Location: 22975 - 24426 (+)
Gene ID: HRGMv2_0438_14_20
Type: TC
Location: 24592 - 26259 (+)
Gene ID: HRGMv2_0438_14_21
Type: CAZyme
Location: 26482 - 28635 (-)
Gene ID: HRGMv2_0438_14_22
Type: CAZyme
Location: 28657 - 31155 (-)
Gene ID: HRGMv2_0438_14_23
Type: CAZyme
Location: 31190 - 32995 (-)
Gene ID: HRGMv2_0438_14_24
Type: pfam
Location: 33009 - 34505 (-)
Gene ID: HRGMv2_0438_14_25
Type: TC
Location: 34525 - 36030 (-)
Gene ID: HRGMv2_0438_14_26
Type: TC
Location: 36030 - 39032 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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