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Cluster: HRGMv2_0438_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0438_11 HRGMv2_0438_11_48 56844 58538 - 2.A.21.3.19
sulfatase HRGMv2_0438_11 HRGMv2_0438_11_49 58562 59701 - S1_22
CAZyme HRGMv2_0438_11 HRGMv2_0438_11_50 59866 61785 - GH43_4
NULL(UNKNOWN) HRGMv2_0438_11 HRGMv2_0438_11_51 61872 62300 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0438_11 HRGMv2_0438_11_52 62316 64145 - SusD_RagB | SusD-like_3
TC HRGMv2_0438_11 HRGMv2_0438_11_53 64178 67423 - 1.B.14.6.2
TC HRGMv2_0438_11 HRGMv2_0438_11_54 67444 69189 - 8.A.46.1.3
TC HRGMv2_0438_11 HRGMv2_0438_11_55 69198 72323 - 1.B.14.6.1
pfam HRGMv2_0438_11 HRGMv2_0438_11_56 72349 74196 - Laminin_G_3
TF HRGMv2_0438_11 HRGMv2_0438_11_57 74530 78807 - HTH_AraC
CAZyme HRGMv2_0438_11 HRGMv2_0438_11_58 78994 80490 + GH43_4
CAZyme HRGMv2_0438_11 HRGMv2_0438_11_59 80517 82496 + GH51_2
CAZyme HRGMv2_0438_11 HRGMv2_0438_11_60 82504 83487 + GH43_29
pfam HRGMv2_0438_11 HRGMv2_0438_11_61 83616 84770 - GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg
TC HRGMv2_0438_11 HRGMv2_0438_11_62 84820 86130 - 2.A.1.7.2
Gene ID: HRGMv2_0438_11_48
Type: TC
Location: 56844 - 58538 (-)
Gene ID: HRGMv2_0438_11_49
Type: sulfatase
Location: 58562 - 59701 (-)
Gene ID: HRGMv2_0438_11_50
Type: CAZyme
Location: 59866 - 61785 (-)
Gene ID: HRGMv2_0438_11_51
Type:
Location: 61872 - 62300 (-)
Gene ID: HRGMv2_0438_11_52
Type: pfam
Location: 62316 - 64145 (-)
Gene ID: HRGMv2_0438_11_53
Type: TC
Location: 64178 - 67423 (-)
Gene ID: HRGMv2_0438_11_54
Type: TC
Location: 67444 - 69189 (-)
Gene ID: HRGMv2_0438_11_55
Type: TC
Location: 69198 - 72323 (-)
Gene ID: HRGMv2_0438_11_56
Type: pfam
Location: 72349 - 74196 (-)
Gene ID: HRGMv2_0438_11_57
Type: TF
Location: 74530 - 78807 (-)
Gene ID: HRGMv2_0438_11_58
Type: CAZyme
Location: 78994 - 80490 (+)
Gene ID: HRGMv2_0438_11_59
Type: CAZyme
Location: 80517 - 82496 (+)
Gene ID: HRGMv2_0438_11_60
Type: CAZyme
Location: 82504 - 83487 (+)
Gene ID: HRGMv2_0438_11_61
Type: pfam
Location: 83616 - 84770 (-)
Gene ID: HRGMv2_0438_11_62
Type: TC
Location: 84820 - 86130 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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