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Cluster: HRGMv2_0438_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0438_10 HRGMv2_0438_10_2 3666 6932 + 1.B.14.6.1
pfam HRGMv2_0438_10 HRGMv2_0438_10_3 6960 8474 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) HRGMv2_0438_10 HRGMv2_0438_10_4 8496 10397 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0438_10 HRGMv2_0438_10_5 10466 11596 + GH16_3
CAZyme HRGMv2_0438_10 HRGMv2_0438_10_6 11664 13910 + GH3
pfam HRGMv2_0438_10 HRGMv2_0438_10_7 14457 15734 - Enolase_C | Enolase_N | MR_MLE_C
pfam HRGMv2_0438_10 HRGMv2_0438_10_8 15758 16162 - Pentapeptide | Pentapeptide_4
TC HRGMv2_0438_10 HRGMv2_0438_10_9 16122 16499 - 1.A.43.1.1
Gene ID: HRGMv2_0438_10_2
Type: TC
Location: 3666 - 6932 (+)
Gene ID: HRGMv2_0438_10_3
Type: pfam
Location: 6960 - 8474 (+)
Gene ID: HRGMv2_0438_10_4
Type:
Location: 8496 - 10397 (+)
Gene ID: HRGMv2_0438_10_5
Type: CAZyme
Location: 10466 - 11596 (+)
Gene ID: HRGMv2_0438_10_6
Type: CAZyme
Location: 11664 - 13910 (+)
Gene ID: HRGMv2_0438_10_7
Type: pfam
Location: 14457 - 15734 (-)
Gene ID: HRGMv2_0438_10_8
Type: pfam
Location: 15758 - 16162 (-)
Gene ID: HRGMv2_0438_10_9
Type: TC
Location: 16122 - 16499 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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