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Cluster: HRGMv2_0438_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0438_7 HRGMv2_0438_7_9 8388 11708 + GH35 | GH43_24
CAZyme HRGMv2_0438_7 HRGMv2_0438_7_10 11781 12881 - GH43_24
CAZyme HRGMv2_0438_7 HRGMv2_0438_7_11 12977 14473 - GH16_3
CAZyme HRGMv2_0438_7 HRGMv2_0438_7_12 14492 15382 - CBM32
pfam HRGMv2_0438_7 HRGMv2_0438_7_13 15409 17085 - SusD_RagB | SusD-like_3
TC HRGMv2_0438_7 HRGMv2_0438_7_14 17124 20144 - 1.B.14.6.1
pfam HRGMv2_0438_7 HRGMv2_0438_7_15 20183 22096 - SusD_RagB | SusD-like_3
TC HRGMv2_0438_7 HRGMv2_0438_7_16 22131 25268 - 1.B.14.6.1
Gene ID: HRGMv2_0438_7_9
Type: CAZyme
Location: 8388 - 11708 (+)
Gene ID: HRGMv2_0438_7_10
Type: CAZyme
Location: 11781 - 12881 (-)
Gene ID: HRGMv2_0438_7_11
Type: CAZyme
Location: 12977 - 14473 (-)
Gene ID: HRGMv2_0438_7_12
Type: CAZyme
Location: 14492 - 15382 (-)
Gene ID: HRGMv2_0438_7_13
Type: pfam
Location: 15409 - 17085 (-)
Gene ID: HRGMv2_0438_7_14
Type: TC
Location: 17124 - 20144 (-)
Gene ID: HRGMv2_0438_7_15
Type: pfam
Location: 20183 - 22096 (-)
Gene ID: HRGMv2_0438_7_16
Type: TC
Location: 22131 - 25268 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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